Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.09□□□□□ -0.15
UBCP0CG48 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBCP0CG48 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBCP0CG48 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBCP0CG48 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBCP0CG48 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.09□□□□□ -0.15
UBCP0CG48 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBCP0CG48 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBCP0CG48 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
UBCP0CG48 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.09□□□□□ -0.15
UBCP0CG48 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.09□□□□□ -0.15
UBCP0CG48 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.09□□□□□ -0.15
UBCP0CG48 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBCP0CG48 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBCP0CG48 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
UBCP0CG48 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.09□□□□□ -0.15
UBCP0CG48 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
UBCP0CG48 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.09□□□□□ -0.15
UBCP0CG48 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
UBCP0CG48 AC079781.3-201ENST00000449110 356 ntBASIC14.09□□□□□ -0.15
UBCP0CG48 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
UBCP0CG48 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.09□□□□□ -0.15
UBCP0CG48 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.09□□□□□ -0.15
UBCP0CG48 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.09□□□□□ -0.15
UBCP0CG48 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.09□□□□□ -0.15
UBCP0CG48 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBCP0CG48 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
UBCP0CG48 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.09□□□□□ -0.15
UBCP0CG48 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
UBCP0CG48 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBCP0CG48 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.09□□□□□ -0.15
UBCP0CG48 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBCP0CG48 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
UBCP0CG48 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
UBCP0CG48 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.09□□□□□ -0.15
UBCP0CG48 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBCP0CG48 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBCP0CG48 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.09□□□□□ -0.15
UBCP0CG48 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBCP0CG48 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBCP0CG48 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.09□□□□□ -0.15
UBCP0CG48 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBCP0CG48 SBF1P1-201ENST00000444527 5631 ntBASIC14.09□□□□□ -0.15
UBCP0CG48 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
UBCP0CG48 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
UBCP0CG48 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
UBCP0CG48 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
UBCP0CG48 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
UBCP0CG48 AC023157.3-201ENST00000619086 2088 ntBASIC14.08□□□□□ -0.15
UBCP0CG48 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
UBCP0CG48 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.08□□□□□ -0.15
UBCP0CG48 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.08□□□□□ -0.16
UBCP0CG48 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.08□□□□□ -0.16
UBCP0CG48 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.08□□□□□ -0.16
UBCP0CG48 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.16
UBCP0CG48 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
UBCP0CG48 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.08□□□□□ -0.16
UBCP0CG48 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.08□□□□□ -0.16
UBCP0CG48 PRYP6-201ENST00000514804 343 ntBASIC14.08□□□□□ -0.16
UBCP0CG48 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.08□□□□□ -0.16
UBCP0CG48 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.08□□□□□ -0.16
UBCP0CG48 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.08□□□□□ -0.16
UBCP0CG48 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
UBCP0CG48 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.08□□□□□ -0.16
UBCP0CG48 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
UBCP0CG48 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.08□□□□□ -0.16
UBCP0CG48 AL691432.3-201ENST00000621860 400 ntBASIC14.08□□□□□ -0.16
UBCP0CG48 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
UBCP0CG48 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
UBCP0CG48 AP002414.2-201ENST00000591780 3365 ntBASIC14.08□□□□□ -0.16
UBCP0CG48 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
UBCP0CG48 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
UBCP0CG48 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
UBCP0CG48 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.08□□□□□ -0.16
UBCP0CG48 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.08□□□□□ -0.16
UBCP0CG48 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.08□□□□□ -0.16
UBCP0CG48 AC138035.3-201ENST00000622706 2791 ntBASIC14.08□□□□□ -0.16
UBCP0CG48 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
UBCP0CG48 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.08□□□□□ -0.16
UBCP0CG48 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBCP0CG48 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.08□□□□□ -0.16
UBCP0CG48 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms