Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SFTPBP07988 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.99□□□□□ -0.17
SFTPBP07988 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.99□□□□□ -0.17
SFTPBP07988 AC005622.1-201ENST00000636801 1703 ntBASIC13.99□□□□□ -0.17
SFTPBP07988 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
SFTPBP07988 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 BCAR1-209ENST00000546196 1340 ntBASIC13.99□□□□□ -0.17
SFTPBP07988 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.99□□□□□ -0.17
SFTPBP07988 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SFTPBP07988 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.99□□□□□ -0.17
SFTPBP07988 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.99□□□□□ -0.17
SFTPBP07988 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.99□□□□□ -0.17
SFTPBP07988 DNAJB3-201ENST00000446806 729 ntBASIC13.99□□□□□ -0.17
SFTPBP07988 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.99□□□□□ -0.17
SFTPBP07988 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.99□□□□□ -0.17
SFTPBP07988 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
SFTPBP07988 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.99□□□□□ -0.17
SFTPBP07988 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SFTPBP07988 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.99□□□□□ -0.17
SFTPBP07988 AC096734.2-201ENST00000562054 433 ntBASIC13.99□□□□□ -0.17
SFTPBP07988 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 MIR3687-2-201ENST00000577708 61 ntBASIC13.99□□□□□ -0.17
SFTPBP07988 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.99□□□□□ -0.17
SFTPBP07988 MIR3687-1-201ENST00000614492 61 ntBASIC13.99□□□□□ -0.17
SFTPBP07988 AC004877.2-201ENST00000623941 599 ntBASIC13.99□□□□□ -0.17
SFTPBP07988 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SFTPBP07988 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.99□□□□□ -0.17
SFTPBP07988 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.99□□□□□ -0.17
SFTPBP07988 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SFTPBP07988 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.98□□□□□ -0.17
SFTPBP07988 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.98□□□□□ -0.17
SFTPBP07988 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.98□□□□□ -0.17
SFTPBP07988 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.98□□□□□ -0.17
SFTPBP07988 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.98□□□□□ -0.17
SFTPBP07988 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
SFTPBP07988 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.98□□□□□ -0.17
SFTPBP07988 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 RPSAP43-201ENST00000402237 625 ntBASIC13.98□□□□□ -0.17
SFTPBP07988 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SFTPBP07988 AL513480.1-201ENST00000451731 511 ntBASIC13.98□□□□□ -0.17
SFTPBP07988 AC112482.1-201ENST00000492080 688 ntBASIC13.98□□□□□ -0.17
SFTPBP07988 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.98□□□□□ -0.17
SFTPBP07988 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.98□□□□□ -0.17
SFTPBP07988 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 AC055717.3-201ENST00000622967 595 ntBASIC13.98□□□□□ -0.17
SFTPBP07988 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SFTPBP07988 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.98□□□□□ -0.17
SFTPBP07988 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SFTPBP07988 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms