Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
PDGFAP04085 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDGFAP04085 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.02■□□□□ -0
PDGFAP04085 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.02■□□□□ -0
PDGFAP04085 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.02■□□□□ -0
PDGFAP04085 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PDGFAP04085 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PDGFAP04085 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
PDGFAP04085 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.02■□□□□ -0
PDGFAP04085 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDGFAP04085 AC092053.1-201ENST00000605787 1936 ntBASIC15.02■□□□□ -0
PDGFAP04085 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PDGFAP04085 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
PDGFAP04085 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PDGFAP04085 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.02■□□□□ -0
PDGFAP04085 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDGFAP04085 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.02■□□□□ -0
PDGFAP04085 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PDGFAP04085 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PDGFAP04085 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.02■□□□□ -0
PDGFAP04085 AC093004.1-201ENST00000508850 424 ntBASIC15.02■□□□□ -0
PDGFAP04085 KRT17P8-201ENST00000540749 863 ntBASIC15.02■□□□□ -0
PDGFAP04085 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.02■□□□□ -0
PDGFAP04085 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PDGFAP04085 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.02■□□□□ -0
PDGFAP04085 RN7SL832P-201ENST00000607781 1756 ntBASIC15.02□□□□□ -0.01
PDGFAP04085 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PDGFAP04085 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PDGFAP04085 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
PDGFAP04085 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDGFAP04085 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDGFAP04085 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.02□□□□□ -0.01
PDGFAP04085 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PDGFAP04085 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDGFAP04085 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.02□□□□□ -0.01
PDGFAP04085 AC006277.1-201ENST00000624348 1610 ntBASIC15.02□□□□□ -0.01
PDGFAP04085 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDGFAP04085 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDGFAP04085 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.02□□□□□ -0.01
PDGFAP04085 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PDGFAP04085 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PDGFAP04085 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDGFAP04085 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDGFAP04085 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFAP04085 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.01□□□□□ -0.01
PDGFAP04085 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.01□□□□□ -0.01
PDGFAP04085 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFAP04085 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFAP04085 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFAP04085 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.01□□□□□ -0.01
PDGFAP04085 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
PDGFAP04085 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFAP04085 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PDGFAP04085 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.01□□□□□ -0.01
PDGFAP04085 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.01□□□□□ -0.01
PDGFAP04085 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.01□□□□□ -0.01
PDGFAP04085 MIR658-201ENST00000385210 100 ntBASIC15.01□□□□□ -0.01
PDGFAP04085 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.01□□□□□ -0.01
PDGFAP04085 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.01□□□□□ -0.01
PDGFAP04085 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PDGFAP04085 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFAP04085 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFAP04085 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.01□□□□□ -0.01
PDGFAP04085 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.01□□□□□ -0.01
PDGFAP04085 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.01□□□□□ -0.01
PDGFAP04085 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
PDGFAP04085 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFAP04085 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.01□□□□□ -0.01
PDGFAP04085 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFAP04085 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFAP04085 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFAP04085 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.01□□□□□ -0.01
PDGFAP04085 AL138688.1-201ENST00000624851 1594 ntBASIC15.01□□□□□ -0.01
PDGFAP04085 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFAP04085 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFAP04085 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFAP04085 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFAP04085 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFAP04085 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFAP04085 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.01□□□□□ -0.01
PDGFAP04085 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFAP04085 AC104640.1-201ENST00000562617 2109 ntBASIC15.01□□□□□ -0.01
PDGFAP04085 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFAP04085 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFAP04085 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PDGFAP04085 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PDGFAP04085 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFAP04085 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFAP04085 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFAP04085 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDGFAP04085 SLC7A15P-201ENST00000424028 1363 ntBASIC15□□□□□ -0.01
PDGFAP04085 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFAP04085 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PDGFAP04085 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFAP04085 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFAP04085 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15□□□□□ -0.01
PDGFAP04085 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PDGFAP04085 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PDGFAP04085 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFAP04085 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms