Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1BO75841 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
UPK1BO75841 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
UPK1BO75841 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1BO75841 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1BO75841 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1BO75841 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
UPK1BO75841 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
UPK1BO75841 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1BO75841 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
UPK1BO75841 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UPK1BO75841 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
UPK1BO75841 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
UPK1BO75841 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.96□□□□□ -0.17
UPK1BO75841 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 AC005562.1-201ENST00000583030 3219 ntBASIC13.96□□□□□ -0.17
UPK1BO75841 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.96□□□□□ -0.17
UPK1BO75841 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
UPK1BO75841 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.96□□□□□ -0.17
UPK1BO75841 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
UPK1BO75841 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
UPK1BO75841 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
UPK1BO75841 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
UPK1BO75841 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.96□□□□□ -0.17
UPK1BO75841 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.96□□□□□ -0.17
UPK1BO75841 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
UPK1BO75841 RASA4DP-201ENST00000460726 1199 ntBASIC13.96□□□□□ -0.17
UPK1BO75841 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.96□□□□□ -0.17
UPK1BO75841 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.96□□□□□ -0.17
UPK1BO75841 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.96□□□□□ -0.17
UPK1BO75841 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.96□□□□□ -0.17
UPK1BO75841 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.96□□□□□ -0.17
UPK1BO75841 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
UPK1BO75841 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.96□□□□□ -0.17
UPK1BO75841 AC073648.6-201ENST00000641589 218 ntBASIC13.96□□□□□ -0.17
UPK1BO75841 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
UPK1BO75841 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 AC152010.1-201ENST00000415779 2006 ntBASIC13.96□□□□□ -0.17
UPK1BO75841 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
UPK1BO75841 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK1BO75841 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.96□□□□□ -0.17
UPK1BO75841 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.96□□□□□ -0.18
UPK1BO75841 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
UPK1BO75841 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.18
UPK1BO75841 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
UPK1BO75841 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
UPK1BO75841 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
UPK1BO75841 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.96□□□□□ -0.18
UPK1BO75841 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.96□□□□□ -0.18
UPK1BO75841 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.95□□□□□ -0.18
UPK1BO75841 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.95□□□□□ -0.18
UPK1BO75841 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.95□□□□□ -0.18
UPK1BO75841 AC131009.4-201ENST00000624048 1740 ntBASIC13.95□□□□□ -0.18
UPK1BO75841 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.95□□□□□ -0.18
UPK1BO75841 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.95□□□□□ -0.18
UPK1BO75841 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
UPK1BO75841 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.95□□□□□ -0.18
UPK1BO75841 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.95□□□□□ -0.18
UPK1BO75841 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.95□□□□□ -0.18
UPK1BO75841 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
UPK1BO75841 MST1P2-201ENST00000457982 2291 ntBASIC13.95□□□□□ -0.18
UPK1BO75841 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms