Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 KRT8P37-201ENST00000451609 1420 ntBASIC15.06■□□□□ 0
LDB3O75112 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LDB3O75112 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.06■□□□□ 0
LDB3O75112 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.06■□□□□ 0
LDB3O75112 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LDB3O75112 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.06■□□□□ 0
LDB3O75112 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LDB3O75112 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LDB3O75112 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LDB3O75112 REXO1L1P-202ENST00000608646 1974 ntBASIC15.05■□□□□ 0
LDB3O75112 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.05■□□□□ 0
LDB3O75112 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.05■□□□□ 0
LDB3O75112 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.05■□□□□ 0
LDB3O75112 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LDB3O75112 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.05■□□□□ 0
LDB3O75112 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.05■□□□□ 0
LDB3O75112 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
LDB3O75112 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LDB3O75112 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LDB3O75112 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LDB3O75112 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
LDB3O75112 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.05■□□□□ 0
LDB3O75112 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LDB3O75112 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.05■□□□□ 0
LDB3O75112 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LDB3O75112 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LDB3O75112 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
LDB3O75112 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LDB3O75112 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.05■□□□□ -0
LDB3O75112 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.05■□□□□ -0
LDB3O75112 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.05■□□□□ -0
LDB3O75112 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LDB3O75112 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.05■□□□□ -0
LDB3O75112 RPL37AP1-201ENST00000412502 279 ntBASIC15.05■□□□□ -0
LDB3O75112 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.05■□□□□ -0
LDB3O75112 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.05■□□□□ -0
LDB3O75112 AC097493.3-201ENST00000509725 367 ntBASIC15.05■□□□□ -0
LDB3O75112 IGHV3-42-201ENST00000520410 361 ntBASIC15.05■□□□□ -0
LDB3O75112 AC027369.6-201ENST00000525520 931 ntBASIC15.05■□□□□ -0
LDB3O75112 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.05■□□□□ -0
LDB3O75112 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.05■□□□□ -0
LDB3O75112 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.05■□□□□ -0
LDB3O75112 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.05■□□□□ -0
LDB3O75112 AC073592.8-201ENST00000624126 511 ntBASIC15.05■□□□□ -0
LDB3O75112 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.05■□□□□ -0
LDB3O75112 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.05■□□□□ -0
LDB3O75112 AC011477.6-201ENST00000604980 1927 ntBASIC15.05■□□□□ -0
LDB3O75112 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LDB3O75112 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.05■□□□□ -0
LDB3O75112 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
LDB3O75112 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LDB3O75112 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LDB3O75112 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LDB3O75112 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
LDB3O75112 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.05■□□□□ -0
LDB3O75112 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LDB3O75112 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.05■□□□□ -0
LDB3O75112 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
LDB3O75112 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
LDB3O75112 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
LDB3O75112 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LDB3O75112 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.04■□□□□ -0
LDB3O75112 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LDB3O75112 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LDB3O75112 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.04■□□□□ -0
LDB3O75112 AC007950.2-201ENST00000615045 2347 ntBASIC15.04■□□□□ -0
LDB3O75112 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.04■□□□□ -0
LDB3O75112 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LDB3O75112 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.04■□□□□ -0
LDB3O75112 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.04■□□□□ -0
LDB3O75112 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.04■□□□□ -0
LDB3O75112 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LDB3O75112 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LDB3O75112 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
LDB3O75112 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
LDB3O75112 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.04■□□□□ -0
LDB3O75112 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LDB3O75112 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LDB3O75112 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LDB3O75112 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.04■□□□□ -0
LDB3O75112 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
LDB3O75112 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.04■□□□□ -0
LDB3O75112 AC092580.3-201ENST00000430932 139 ntBASIC15.04■□□□□ -0
LDB3O75112 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.04■□□□□ -0
LDB3O75112 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.04■□□□□ -0
LDB3O75112 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.04■□□□□ -0
LDB3O75112 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.04■□□□□ -0
LDB3O75112 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
LDB3O75112 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LDB3O75112 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LDB3O75112 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LDB3O75112 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
LDB3O75112 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.04■□□□□ -0
LDB3O75112 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
LDB3O75112 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LDB3O75112 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LDB3O75112 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LDB3O75112 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.04■□□□□ -0
LDB3O75112 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.04■□□□□ -0
LDB3O75112 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms