Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PFDN1O60925 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.27□□□□□ -0.13
PFDN1O60925 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.27□□□□□ -0.13
PFDN1O60925 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.27□□□□□ -0.13
PFDN1O60925 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.27□□□□□ -0.13
PFDN1O60925 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.27□□□□□ -0.13
PFDN1O60925 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.27□□□□□ -0.13
PFDN1O60925 AC231657.2-201ENST00000624556 255 ntBASIC14.27□□□□□ -0.13
PFDN1O60925 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.27□□□□□ -0.13
PFDN1O60925 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PFDN1O60925 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.27□□□□□ -0.13
PFDN1O60925 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PFDN1O60925 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.27□□□□□ -0.13
PFDN1O60925 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.27□□□□□ -0.13
PFDN1O60925 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.27□□□□□ -0.13
PFDN1O60925 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
PFDN1O60925 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN1O60925 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN1O60925 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN1O60925 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.26□□□□□ -0.13
PFDN1O60925 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN1O60925 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN1O60925 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN1O60925 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
PFDN1O60925 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN1O60925 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN1O60925 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN1O60925 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.26□□□□□ -0.13
PFDN1O60925 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN1O60925 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PFDN1O60925 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.26□□□□□ -0.13
PFDN1O60925 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PFDN1O60925 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PFDN1O60925 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN1O60925 AC105250.1-201ENST00000509378 2057 ntBASIC14.26□□□□□ -0.13
PFDN1O60925 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PFDN1O60925 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN1O60925 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN1O60925 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN1O60925 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.26□□□□□ -0.13
PFDN1O60925 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.26□□□□□ -0.13
PFDN1O60925 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN1O60925 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.26□□□□□ -0.13
PFDN1O60925 AC120498.8-201ENST00000614275 531 ntBASIC14.26□□□□□ -0.13
PFDN1O60925 BEND3P3-201ENST00000611030 2440 ntBASIC14.26□□□□□ -0.13
PFDN1O60925 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PFDN1O60925 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN1O60925 AC097359.2-201ENST00000604992 2389 ntBASIC14.26□□□□□ -0.13
PFDN1O60925 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN1O60925 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.26□□□□□ -0.13
PFDN1O60925 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PFDN1O60925 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.26□□□□□ -0.13
PFDN1O60925 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN1O60925 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.26□□□□□ -0.13
PFDN1O60925 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN1O60925 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN1O60925 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.25□□□□□ -0.13
PFDN1O60925 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 AC130686.1-201ENST00000622936 2466 ntBASIC14.25□□□□□ -0.13
PFDN1O60925 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC14.25□□□□□ -0.13
PFDN1O60925 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.25□□□□□ -0.13
PFDN1O60925 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.25□□□□□ -0.13
PFDN1O60925 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 AC002558.1-201ENST00000488906 803 ntBASIC14.25□□□□□ -0.13
PFDN1O60925 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms