Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 TTTY23B-201ENST00000442790 549 ntBASIC15.88■□□□□ 0.13
PCDHGA12O60330 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 MYCLP2-201ENST00000449268 967 ntBASIC15.88■□□□□ 0.13
PCDHGA12O60330 RN7SL837P-201ENST00000463010 287 ntBASIC15.88■□□□□ 0.13
PCDHGA12O60330 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 AP002490.2-201ENST00000524791 560 ntBASIC15.88■□□□□ 0.13
PCDHGA12O60330 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA12O60330 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGA12O60330 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA12O60330 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGA12O60330 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGA12O60330 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA12O60330 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA12O60330 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGA12O60330 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGA12O60330 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA12O60330 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PCDHGA12O60330 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA12O60330 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA12O60330 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA12O60330 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA12O60330 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGA12O60330 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHGA12O60330 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHGA12O60330 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHGA12O60330 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA12O60330 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGA12O60330 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGA12O60330 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA12O60330 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGA12O60330 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA12O60330 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHGA12O60330 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
PCDHGA12O60330 RRP7BP-205ENST00000566851 833 ntBASIC15.87■□□□□ 0.13
PCDHGA12O60330 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGA12O60330 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA12O60330 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA12O60330 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGA12O60330 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA12O60330 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA12O60330 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGA12O60330 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGA12O60330 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGA12O60330 AL513523.2-202ENST00000427283 2040 ntBASIC15.87■□□□□ 0.13
PCDHGA12O60330 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA12O60330 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA12O60330 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA12O60330 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA12O60330 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGA12O60330 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA12O60330 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA12O60330 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGA12O60330 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA12O60330 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA12O60330 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA12O60330 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGA12O60330 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA12O60330 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA12O60330 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGA12O60330 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA12O60330 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGA12O60330 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PCDHGA12O60330 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.86■□□□□ 0.13
PCDHGA12O60330 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PCDHGA12O60330 MIR658-201ENST00000385210 100 ntBASIC15.86■□□□□ 0.13
PCDHGA12O60330 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHGA12O60330 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGA12O60330 AC022210.1-201ENST00000449856 793 ntBASIC15.86■□□□□ 0.13
PCDHGA12O60330 AL139010.1-201ENST00000454878 894 ntBASIC15.86■□□□□ 0.13
PCDHGA12O60330 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA12O60330 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA12O60330 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.86■□□□□ 0.13
PCDHGA12O60330 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHGA12O60330 AC123567.1-201ENST00000548294 1261 ntBASIC15.86■□□□□ 0.13
PCDHGA12O60330 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA12O60330 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms