Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.59■□□□□ 0.25
MSI1O43347 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.59■□□□□ 0.25
MSI1O43347 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
MSI1O43347 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.59■□□□□ 0.25
MSI1O43347 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.59■□□□□ 0.25
MSI1O43347 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.59■□□□□ 0.25
MSI1O43347 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.59■□□□□ 0.25
MSI1O43347 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.59■□□□□ 0.25
MSI1O43347 ZNF890P-202ENST00000530367 1156 ntBASIC16.59■□□□□ 0.25
MSI1O43347 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.59■□□□□ 0.25
MSI1O43347 AC104794.3-201ENST00000566840 1248 ntBASIC16.59■□□□□ 0.25
MSI1O43347 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
MSI1O43347 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.59■□□□□ 0.25
MSI1O43347 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.59■□□□□ 0.25
MSI1O43347 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
MSI1O43347 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.59■□□□□ 0.25
MSI1O43347 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.59■□□□□ 0.25
MSI1O43347 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
MSI1O43347 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
MSI1O43347 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
MSI1O43347 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.59■□□□□ 0.25
MSI1O43347 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MSI1O43347 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.59■□□□□ 0.25
MSI1O43347 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
MSI1O43347 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
MSI1O43347 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MSI1O43347 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MSI1O43347 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MSI1O43347 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.59■□□□□ 0.25
MSI1O43347 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.59■□□□□ 0.25
MSI1O43347 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MSI1O43347 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MSI1O43347 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.59■□□□□ 0.25
MSI1O43347 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
MSI1O43347 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.58■□□□□ 0.25
MSI1O43347 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MSI1O43347 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.58■□□□□ 0.25
MSI1O43347 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
MSI1O43347 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.58■□□□□ 0.25
MSI1O43347 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MSI1O43347 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MSI1O43347 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
MSI1O43347 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MSI1O43347 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.58■□□□□ 0.24
MSI1O43347 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.58■□□□□ 0.24
MSI1O43347 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.58■□□□□ 0.24
MSI1O43347 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.58■□□□□ 0.24
MSI1O43347 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.58■□□□□ 0.24
MSI1O43347 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.58■□□□□ 0.24
MSI1O43347 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.58■□□□□ 0.24
MSI1O43347 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.58■□□□□ 0.24
MSI1O43347 AC008761.3-201ENST00000624803 892 ntBASIC16.58■□□□□ 0.24
MSI1O43347 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.58■□□□□ 0.24
MSI1O43347 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MSI1O43347 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.58■□□□□ 0.24
MSI1O43347 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MSI1O43347 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
MSI1O43347 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.58■□□□□ 0.24
MSI1O43347 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
MSI1O43347 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MSI1O43347 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MSI1O43347 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
MSI1O43347 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MSI1O43347 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MSI1O43347 AC026691.1-201ENST00000602502 2017 ntBASIC16.58■□□□□ 0.24
MSI1O43347 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
MSI1O43347 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.58■□□□□ 0.24
MSI1O43347 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MSI1O43347 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MSI1O43347 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MSI1O43347 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MSI1O43347 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.58■□□□□ 0.24
MSI1O43347 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MSI1O43347 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.58■□□□□ 0.24
MSI1O43347 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MSI1O43347 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.57■□□□□ 0.24
MSI1O43347 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
MSI1O43347 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.57■□□□□ 0.24
MSI1O43347 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.57■□□□□ 0.24
MSI1O43347 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.57■□□□□ 0.24
MSI1O43347 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MSI1O43347 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.57■□□□□ 0.24
MSI1O43347 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.57■□□□□ 0.24
MSI1O43347 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.57■□□□□ 0.24
MSI1O43347 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
MSI1O43347 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.57■□□□□ 0.24
MSI1O43347 LINC02084-201ENST00000606069 1096 ntBASIC16.57■□□□□ 0.24
MSI1O43347 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms