Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 SPTSSB-204ENST00000617024 1292 ntBASIC15.19■□□□□ 0.02
UPK1AO00322 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.19■□□□□ 0.02
UPK1AO00322 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
UPK1AO00322 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
UPK1AO00322 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.19■□□□□ 0.02
UPK1AO00322 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK1AO00322 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.19■□□□□ 0.02
UPK1AO00322 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK1AO00322 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
UPK1AO00322 ELL2P1-201ENST00000413990 1906 ntBASIC15.19■□□□□ 0.02
UPK1AO00322 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
UPK1AO00322 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
UPK1AO00322 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
UPK1AO00322 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK1AO00322 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK1AO00322 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1AO00322 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.18■□□□□ 0.02
UPK1AO00322 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1AO00322 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1AO00322 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1AO00322 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.18■□□□□ 0.02
UPK1AO00322 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.18■□□□□ 0.02
UPK1AO00322 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1AO00322 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
UPK1AO00322 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.18■□□□□ 0.02
UPK1AO00322 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1AO00322 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1AO00322 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.18■□□□□ 0.02
UPK1AO00322 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.18■□□□□ 0.02
UPK1AO00322 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.18■□□□□ 0.02
UPK1AO00322 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1AO00322 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1AO00322 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1AO00322 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.18■□□□□ 0.02
UPK1AO00322 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1AO00322 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1AO00322 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1AO00322 AC142381.1-201ENST00000426099 345 ntBASIC15.18■□□□□ 0.02
UPK1AO00322 DNAJB3-201ENST00000446806 729 ntBASIC15.18■□□□□ 0.02
UPK1AO00322 AC245100.5-201ENST00000452108 331 ntBASIC15.18■□□□□ 0.02
UPK1AO00322 TIMM8BP1-201ENST00000452384 211 ntBASIC15.18■□□□□ 0.02
UPK1AO00322 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.18■□□□□ 0.02
UPK1AO00322 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.18■□□□□ 0.02
UPK1AO00322 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.18■□□□□ 0.02
UPK1AO00322 AC005829.1-201ENST00000570002 483 ntBASIC15.18■□□□□ 0.02
UPK1AO00322 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.18■□□□□ 0.02
UPK1AO00322 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.18■□□□□ 0.02
UPK1AO00322 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.18■□□□□ 0.02
UPK1AO00322 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.18■□□□□ 0.02
UPK1AO00322 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.18■□□□□ 0.02
UPK1AO00322 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1AO00322 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1AO00322 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1AO00322 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.18■□□□□ 0.02
UPK1AO00322 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1AO00322 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1AO00322 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1AO00322 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1AO00322 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1AO00322 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.17■□□□□ 0.02
UPK1AO00322 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.17■□□□□ 0.02
UPK1AO00322 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1AO00322 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
UPK1AO00322 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.17■□□□□ 0.02
UPK1AO00322 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1AO00322 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
UPK1AO00322 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
UPK1AO00322 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
UPK1AO00322 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1AO00322 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1AO00322 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
UPK1AO00322 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
UPK1AO00322 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.17■□□□□ 0.02
UPK1AO00322 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
UPK1AO00322 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1AO00322 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
UPK1AO00322 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1AO00322 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1AO00322 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
UPK1AO00322 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1AO00322 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1AO00322 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1AO00322 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
UPK1AO00322 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
UPK1AO00322 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.17■□□□□ 0.02
UPK1AO00322 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1AO00322 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.17■□□□□ 0.02
UPK1AO00322 MIR346-201ENST00000362234 95 ntBASIC15.17■□□□□ 0.02
UPK1AO00322 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.17■□□□□ 0.02
UPK1AO00322 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
UPK1AO00322 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.17■□□□□ 0.02
UPK1AO00322 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.17■□□□□ 0.02
UPK1AO00322 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.17■□□□□ 0.02
UPK1AO00322 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.17■□□□□ 0.02
UPK1AO00322 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.17■□□□□ 0.02
UPK1AO00322 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
UPK1AO00322 TCAF2P1-201ENST00000291129 2421 ntBASIC15.17■□□□□ 0.02
UPK1AO00322 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1AO00322 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1AO00322 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms