Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC11.28□□□□□ -0.6
LINC01546A6NGU7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 AC011474.4-201ENST00000623523 2076 ntBASIC11.28□□□□□ -0.6
LINC01546A6NGU7 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
LINC01546A6NGU7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01546A6NGU7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01546A6NGU7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
LINC01546A6NGU7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01546A6NGU7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01546A6NGU7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01546A6NGU7 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01546A6NGU7 AC073508.3-201ENST00000619697 1419 ntBASIC11.27□□□□□ -0.6
LINC01546A6NGU7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01546A6NGU7 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01546A6NGU7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01546A6NGU7 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01546A6NGU7 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01546A6NGU7 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.27□□□□□ -0.6
LINC01546A6NGU7 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01546A6NGU7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01546A6NGU7 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01546A6NGU7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC11.27□□□□□ -0.6
LINC01546A6NGU7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 AL589702.1-201ENST00000641229 1509 ntBASIC11.27□□□□□ -0.61
LINC01546A6NGU7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 AC139887.3-201ENST00000568585 713 ntBASIC11.27□□□□□ -0.61
LINC01546A6NGU7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 AC097493.4-201ENST00000641197 219 ntBASIC11.27□□□□□ -0.61
LINC01546A6NGU7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.61
LINC01546A6NGU7 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms