Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC2Q9Y5Z7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC2Q9Y5Z7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC2Q9Y5Z7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC2Q9Y5Z7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC2Q9Y5Z7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC2Q9Y5Z7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC2Q9Y5Z7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 ACKR1-201ENST00000368121 1240 ntBASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 AC004945.1-201ENST00000416738 983 ntBASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 CNN2P8-201ENST00000421872 913 ntBASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 AC006033.1-201ENST00000440505 426 ntBASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 KRT18P43-201ENST00000469825 1281 ntBASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 FAM86HP-204ENST00000513466 959 ntBASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 AC026410.3-201ENST00000514280 936 ntBASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC2Q9Y5Z7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 FLJ38576-201ENST00000623820 2459 ntBASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 MIR326-201ENST00000362220 95 ntBASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 KRT8P13-201ENST00000463294 1010 ntBASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 AL118558.3-201ENST00000607414 1079 ntBASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HCFC2Q9Y5Z7 AL607033.1-201ENST00000623900 1599 ntBASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 AC011676.5-201ENST00000624864 2660 ntBASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 DRD5P1-201ENST00000456605 1438 ntBASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms