Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 AL162727.3-201ENST00000635661 2787 ntBASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 AL080243.2-201ENST00000418783 582 ntBASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 TSPY16P-201ENST00000449843 468 ntBASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A3BPQ9Y5P4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
COL4A3BPQ9Y5P4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
COL4A3BPQ9Y5P4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.46
COL4A3BPQ9Y5P4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
COL4A3BPQ9Y5P4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.89■□□□□ 0.46
COL4A3BPQ9Y5P4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.89■□□□□ 0.46
COL4A3BPQ9Y5P4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 AC105917.1-201ENST00000506637 2539 ntBASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 AC243562.2-201ENST00000561247 970 ntBASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
COL4A3BPQ9Y5P4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 MIR661-201ENST00000384842 89 ntBASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 MRPS18AP1-201ENST00000414458 589 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms