Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 COX5BP8-201ENST00000416911 349 ntBASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 RNA5SP410-201ENST00000516285 106 ntBASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 AC004233.3-201ENST00000607794 1269 ntBASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 SPDYE12P-201ENST00000618416 771 ntBASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB1Q9Y5F3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
PCDHB1Q9Y5F3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB1Q9Y5F3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHB1Q9Y5F3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.02■□□□□ 0.15
PCDHB1Q9Y5F3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB1Q9Y5F3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB1Q9Y5F3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB1Q9Y5F3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB1Q9Y5F3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.02■□□□□ 0.15
PCDHB1Q9Y5F3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
PCDHB1Q9Y5F3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
PCDHB1Q9Y5F3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PCDHB1Q9Y5F3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB1Q9Y5F3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
PCDHB1Q9Y5F3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 AC008894.3-201ENST00000624324 3103 ntBASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 AC011477.6-201ENST00000604980 1927 ntBASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 AC007950.2-201ENST00000615045 2347 ntBASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
PCDHB1Q9Y5F3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 AC022144.1-201ENST00000602255 1580 ntBASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16■□□□□ 0.15
PCDHB1Q9Y5F3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms