Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 ATP5G2P4-201ENST00000442175 420 ntBASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 AC099568.2-201ENST00000609194 695 ntBASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 PCGF3-213ENST00000620529 1899 ntBASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 MEIS3P1-201ENST00000495167 958 ntBASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 TPRX2P-201ENST00000535362 881 ntBASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 GGT4P-201ENST00000623672 1708 ntBASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.23■□□□□ 0.35
SSX2IPQ9Y2D8 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 AL512384.1-201ENST00000406683 331 ntBASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 AC004461.2-201ENST00000629517 803 ntBASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX2IPQ9Y2D8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms