Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC180Q9P1Z9 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC180Q9P1Z9 AC125604.1-201ENST00000496255 707 ntBASIC31.75■■■□□ 2.67
CCDC180Q9P1Z9 AC019193.1-201ENST00000506678 823 ntBASIC31.75■■■□□ 2.67
CCDC180Q9P1Z9 AL805961.1-203ENST00000641078 1258 ntBASIC31.75■■■□□ 2.67
CCDC180Q9P1Z9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC180Q9P1Z9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC180Q9P1Z9 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC180Q9P1Z9 AL158070.2-201ENST00000623713 1621 ntBASIC31.75■■■□□ 2.67
CCDC180Q9P1Z9 AC011477.6-201ENST00000604980 1927 ntBASIC31.75■■■□□ 2.67
CCDC180Q9P1Z9 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC180Q9P1Z9 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC180Q9P1Z9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC31.75■■■□□ 2.67
CCDC180Q9P1Z9 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC180Q9P1Z9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC31.75■■■□□ 2.67
CCDC180Q9P1Z9 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC180Q9P1Z9 MIR6756-201ENST00000616240 63 ntBASIC31.75■■■□□ 2.67
CCDC180Q9P1Z9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CCDC180Q9P1Z9 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
CCDC180Q9P1Z9 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CCDC180Q9P1Z9 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CCDC180Q9P1Z9 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CCDC180Q9P1Z9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
CCDC180Q9P1Z9 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC31.74■■■□□ 2.67
CCDC180Q9P1Z9 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC31.74■■■□□ 2.67
CCDC180Q9P1Z9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CCDC180Q9P1Z9 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC31.74■■■□□ 2.67
CCDC180Q9P1Z9 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC31.74■■■□□ 2.67
CCDC180Q9P1Z9 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC31.74■■■□□ 2.67
CCDC180Q9P1Z9 AC005324.6-201ENST00000587972 613 ntBASIC31.74■■■□□ 2.67
CCDC180Q9P1Z9 PCBP2-OT1-201ENST00000634357 590 ntBASIC31.74■■■□□ 2.67
CCDC180Q9P1Z9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CCDC180Q9P1Z9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
CCDC180Q9P1Z9 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC31.73■■■□□ 2.67
CCDC180Q9P1Z9 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC180Q9P1Z9 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC180Q9P1Z9 NPPA-201ENST00000376476 728 ntTSL 3 BASIC31.73■■■□□ 2.67
CCDC180Q9P1Z9 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC31.73■■■□□ 2.67
CCDC180Q9P1Z9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC180Q9P1Z9 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC31.73■■■□□ 2.67
CCDC180Q9P1Z9 AC009955.4-201ENST00000597192 544 ntBASIC31.73■■■□□ 2.67
CCDC180Q9P1Z9 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC31.73■■■□□ 2.67
CCDC180Q9P1Z9 AL353770.1-201ENST00000614915 403 ntBASIC31.73■■■□□ 2.67
CCDC180Q9P1Z9 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC31.73■■■□□ 2.67
CCDC180Q9P1Z9 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC180Q9P1Z9 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC180Q9P1Z9 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC31.73■■■□□ 2.67
CCDC180Q9P1Z9 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC31.73■■■□□ 2.67
CCDC180Q9P1Z9 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC180Q9P1Z9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
CCDC180Q9P1Z9 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC31.72■■■□□ 2.67
CCDC180Q9P1Z9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
CCDC180Q9P1Z9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC180Q9P1Z9 AMT-224ENST00000635808 1610 ntTSL 5 BASIC31.72■■■□□ 2.67
CCDC180Q9P1Z9 AC114501.1-201ENST00000445949 172 ntBASIC31.72■■■□□ 2.67
CCDC180Q9P1Z9 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC180Q9P1Z9 MIR4754-201ENST00000582477 89 ntBASIC31.72■■■□□ 2.67
CCDC180Q9P1Z9 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC180Q9P1Z9 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC31.72■■■□□ 2.67
CCDC180Q9P1Z9 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC31.72■■■□□ 2.67
CCDC180Q9P1Z9 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC180Q9P1Z9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
CCDC180Q9P1Z9 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
CCDC180Q9P1Z9 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
CCDC180Q9P1Z9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC31.72■■■□□ 2.67
CCDC180Q9P1Z9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC180Q9P1Z9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 RPSAP31-201ENST00000416648 895 ntBASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 LY6E-208ENST00000520531 490 ntTSL 2 BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 AL645608.8-201ENST00000606034 2086 ntBASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 RPS15-201ENST00000233609 534 ntTSL 2 BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 NOC2LP1-201ENST00000450578 752 ntBASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 CENPX-208ENST00000584347 799 ntTSL 2 BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 RPS15-205ENST00000586686 562 ntTSL 5 BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 RPS15-208ENST00000591804 711 ntTSL 5 BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 AL353726.2-201ENST00000623259 884 ntBASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC31.71■■■□□ 2.67
CCDC180Q9P1Z9 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC31.7■■■□□ 2.67
CCDC180Q9P1Z9 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC31.7■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms