Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNIH4Q9P003 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNIH4Q9P003 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.03■□□□□ -0
CNIH4Q9P003 AC144831.1-201ENST00000573312 2656 ntBASIC15.03■□□□□ -0
CNIH4Q9P003 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNIH4Q9P003 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.03■□□□□ -0
CNIH4Q9P003 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.03■□□□□ -0
CNIH4Q9P003 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.03■□□□□ -0
CNIH4Q9P003 AC092384.3-202ENST00000564646 2873 ntBASIC15.03■□□□□ -0
CNIH4Q9P003 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.02■□□□□ -0
CNIH4Q9P003 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CNIH4Q9P003 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CNIH4Q9P003 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CNIH4Q9P003 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
CNIH4Q9P003 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.02■□□□□ -0
CNIH4Q9P003 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CNIH4Q9P003 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.02■□□□□ -0
CNIH4Q9P003 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.02■□□□□ -0
CNIH4Q9P003 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CNIH4Q9P003 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CNIH4Q9P003 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.02■□□□□ -0
CNIH4Q9P003 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CNIH4Q9P003 AP005117.1-202ENST00000581724 1908 ntBASIC15.02■□□□□ -0
CNIH4Q9P003 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.02■□□□□ -0
CNIH4Q9P003 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.02■□□□□ -0
CNIH4Q9P003 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CNIH4Q9P003 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CNIH4Q9P003 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.02■□□□□ -0
CNIH4Q9P003 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.02■□□□□ -0
CNIH4Q9P003 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CNIH4Q9P003 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CNIH4Q9P003 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CNIH4Q9P003 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.02■□□□□ -0
CNIH4Q9P003 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.02■□□□□ -0
CNIH4Q9P003 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.02■□□□□ -0
CNIH4Q9P003 AC024267.1-201ENST00000582320 895 ntBASIC15.02■□□□□ -0
CNIH4Q9P003 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.02■□□□□ -0
CNIH4Q9P003 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CNIH4Q9P003 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.02■□□□□ -0
CNIH4Q9P003 Z92544.3-201ENST00000624747 417 ntBASIC15.02■□□□□ -0
CNIH4Q9P003 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.02■□□□□ -0
CNIH4Q9P003 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNIH4Q9P003 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNIH4Q9P003 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CNIH4Q9P003 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNIH4Q9P003 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CNIH4Q9P003 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNIH4Q9P003 AP3S2-216ENST00000617003 1561 ntBASIC15.02□□□□□ -0.01
CNIH4Q9P003 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNIH4Q9P003 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNIH4Q9P003 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNIH4Q9P003 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNIH4Q9P003 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.01□□□□□ -0.01
CNIH4Q9P003 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.01□□□□□ -0.01
CNIH4Q9P003 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CNIH4Q9P003 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.01□□□□□ -0.01
CNIH4Q9P003 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CNIH4Q9P003 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.01□□□□□ -0.01
CNIH4Q9P003 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CNIH4Q9P003 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.01□□□□□ -0.01
CNIH4Q9P003 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CNIH4Q9P003 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CNIH4Q9P003 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 CYMP-203ENST00000474680 1263 ntBASIC15.01□□□□□ -0.01
CNIH4Q9P003 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.01□□□□□ -0.01
CNIH4Q9P003 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.01□□□□□ -0.01
CNIH4Q9P003 AC018529.1-201ENST00000613063 361 ntBASIC15.01□□□□□ -0.01
CNIH4Q9P003 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 AC106028.4-201ENST00000614509 607 ntBASIC15.01□□□□□ -0.01
CNIH4Q9P003 MIR6080-201ENST00000617359 66 ntBASIC15.01□□□□□ -0.01
CNIH4Q9P003 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.01□□□□□ -0.01
CNIH4Q9P003 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
CNIH4Q9P003 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.01□□□□□ -0.01
CNIH4Q9P003 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CNIH4Q9P003 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
CNIH4Q9P003 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH4Q9P003 FOXO1B-201ENST00000504678 1527 ntBASIC15.01□□□□□ -0.01
CNIH4Q9P003 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CNIH4Q9P003 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.01□□□□□ -0.01
CNIH4Q9P003 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CNIH4Q9P003 AC112504.1-201ENST00000623415 1841 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms