Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 DRAXINP1-201ENST00000437611 948 ntBASIC15.58■□□□□ 0.08
NDE1Q9NXR1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 AC245100.5-201ENST00000452108 331 ntBASIC15.58■□□□□ 0.08
NDE1Q9NXR1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 AC064862.7-201ENST00000604520 867 ntBASIC15.58■□□□□ 0.08
NDE1Q9NXR1 LINC01023-201ENST00000606054 436 ntBASIC15.58■□□□□ 0.08
NDE1Q9NXR1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 KRT18P1-202ENST00000452408 1331 ntBASIC15.58■□□□□ 0.08
NDE1Q9NXR1 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NDE1Q9NXR1 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 AC005521.1-201ENST00000393351 872 ntBASIC15.57■□□□□ 0.08
NDE1Q9NXR1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDE1Q9NXR1 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 AC105250.1-201ENST00000509378 2057 ntBASIC15.56■□□□□ 0.08
NDE1Q9NXR1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 IGHV3-47-201ENST00000425060 335 ntBASIC15.56■□□□□ 0.08
NDE1Q9NXR1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.56■□□□□ 0.08
NDE1Q9NXR1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms