Protein–RNA interactions for Protein: Q9HBH1

PDF, Peptide deformylase, mitochondrial, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDFQ9HBH1 AC015922.1-201ENST00000421102 1152 ntBASIC16.08■□□□□ 0.16
PDFQ9HBH1 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.08■□□□□ 0.16
PDFQ9HBH1 FAM207CP-201ENST00000443486 507 ntBASIC16.08■□□□□ 0.16
PDFQ9HBH1 SERBP1P5-201ENST00000510079 1181 ntBASIC16.08■□□□□ 0.16
PDFQ9HBH1 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.08■□□□□ 0.16
PDFQ9HBH1 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.08■□□□□ 0.16
PDFQ9HBH1 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.08■□□□□ 0.16
PDFQ9HBH1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDFQ9HBH1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.08■□□□□ 0.16
PDFQ9HBH1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.08■□□□□ 0.16
PDFQ9HBH1 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDFQ9HBH1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDFQ9HBH1 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.08■□□□□ 0.16
PDFQ9HBH1 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.08■□□□□ 0.16
PDFQ9HBH1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PDFQ9HBH1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.08■□□□□ 0.16
PDFQ9HBH1 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDFQ9HBH1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDFQ9HBH1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDFQ9HBH1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.08■□□□□ 0.16
PDFQ9HBH1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.08■□□□□ 0.16
PDFQ9HBH1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDFQ9HBH1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PDFQ9HBH1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.07■□□□□ 0.16
PDFQ9HBH1 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
PDFQ9HBH1 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.07■□□□□ 0.16
PDFQ9HBH1 SPTLC1P1-201ENST00000447199 261 ntBASIC16.07■□□□□ 0.16
PDFQ9HBH1 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.07■□□□□ 0.16
PDFQ9HBH1 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PDFQ9HBH1 RN7SL204P-201ENST00000582831 262 ntBASIC16.07■□□□□ 0.16
PDFQ9HBH1 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.07■□□□□ 0.16
PDFQ9HBH1 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.07■□□□□ 0.16
PDFQ9HBH1 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.07■□□□□ 0.16
PDFQ9HBH1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PDFQ9HBH1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.07■□□□□ 0.16
PDFQ9HBH1 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
PDFQ9HBH1 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
PDFQ9HBH1 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PDFQ9HBH1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDFQ9HBH1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.07■□□□□ 0.16
PDFQ9HBH1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDFQ9HBH1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDFQ9HBH1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDFQ9HBH1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDFQ9HBH1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
PDFQ9HBH1 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDFQ9HBH1 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDFQ9HBH1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDFQ9HBH1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDFQ9HBH1 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDFQ9HBH1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PDFQ9HBH1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
PDFQ9HBH1 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDFQ9HBH1 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDFQ9HBH1 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.06■□□□□ 0.16
PDFQ9HBH1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDFQ9HBH1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDFQ9HBH1 AC236430.1-201ENST00000402231 743 ntBASIC16.06■□□□□ 0.16
PDFQ9HBH1 TOMM22P5-201ENST00000416399 439 ntBASIC16.06■□□□□ 0.16
PDFQ9HBH1 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.06■□□□□ 0.16
PDFQ9HBH1 AC002472.2-201ENST00000442739 958 ntBASIC16.06■□□□□ 0.16
PDFQ9HBH1 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDFQ9HBH1 MIR4745-201ENST00000577608 62 ntBASIC16.06■□□□□ 0.16
PDFQ9HBH1 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.06■□□□□ 0.16
PDFQ9HBH1 AL391069.4-201ENST00000609583 481 ntBASIC16.06■□□□□ 0.16
PDFQ9HBH1 AC009118.2-201ENST00000613275 655 ntBASIC16.06■□□□□ 0.16
PDFQ9HBH1 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.06■□□□□ 0.16
PDFQ9HBH1 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.06■□□□□ 0.16
PDFQ9HBH1 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDFQ9HBH1 CICP13-201ENST00000422015 2789 ntBASIC16.06■□□□□ 0.16
PDFQ9HBH1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.06■□□□□ 0.16
PDFQ9HBH1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms