Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 BNIP3P1-202ENST00000550043 1585 ntBASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 AC103702.1-201ENST00000548801 2630 ntBASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 AP3S2-216ENST00000617003 1561 ntBASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 AL139010.1-201ENST00000454878 894 ntBASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC40Q9H9A6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC40Q9H9A6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
LRRC40Q9H9A6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC40Q9H9A6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC40Q9H9A6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC40Q9H9A6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
LRRC40Q9H9A6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC40Q9H9A6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.27■□□□□ 0.19
LRRC40Q9H9A6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
LRRC40Q9H9A6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.27■□□□□ 0.19
LRRC40Q9H9A6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
LRRC40Q9H9A6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC40Q9H9A6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 AC005237.2-201ENST00000434368 219 ntBASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 RARRES2P9-201ENST00000565168 469 ntBASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 MIR3687-2-201ENST00000577708 61 ntBASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 MIR4469-201ENST00000583919 79 ntBASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 MIR3687-1-201ENST00000614492 61 ntBASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 AL513210.1-201ENST00000629608 234 ntBASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms