Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 AC092183.1-201ENST00000469884 875 ntBASIC14.34□□□□□ -0.11
NELFAQ9H3P2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFAQ9H3P2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
NELFAQ9H3P2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NELFAQ9H3P2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.33□□□□□ -0.11
NELFAQ9H3P2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.11
NELFAQ9H3P2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
NELFAQ9H3P2 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
NELFAQ9H3P2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 CDC14C-201ENST00000428251 1719 ntBASIC14.33□□□□□ -0.12
NELFAQ9H3P2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 TSEN15P1-201ENST00000423257 515 ntBASIC14.33□□□□□ -0.12
NELFAQ9H3P2 SPDYE14P-201ENST00000442619 822 ntBASIC14.33□□□□□ -0.12
NELFAQ9H3P2 AC109322.1-201ENST00000524499 1264 ntBASIC14.33□□□□□ -0.12
NELFAQ9H3P2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 MIR4321-201ENST00000592276 80 ntBASIC14.33□□□□□ -0.12
NELFAQ9H3P2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 SPTSSB-204ENST00000617024 1292 ntBASIC14.33□□□□□ -0.12
NELFAQ9H3P2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 LINC02447-202ENST00000501888 2146 ntBASIC14.33□□□□□ -0.12
NELFAQ9H3P2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NELFAQ9H3P2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NELFAQ9H3P2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms