Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AL645939.2-201ENST00000427340 991 ntBASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 CXCL1P1-201ENST00000502804 216 ntBASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 AC063926.3-201ENST00000624734 5658 ntBASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 AC092850.2-201ENST00000623821 2697 ntBASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 AC093028.1-201ENST00000622998 982 ntBASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 PKD1P5-201ENST00000532415 10291 ntBASIC16.56■□□□□ 0.24
FOXP3Q9BZS1 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXP3Q9BZS1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
FOXP3Q9BZS1 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms