Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.24□□□□□ -0.13
VRK1Q99986 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.24□□□□□ -0.13
VRK1Q99986 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.24□□□□□ -0.13
VRK1Q99986 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.24□□□□□ -0.13
VRK1Q99986 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.24□□□□□ -0.13
VRK1Q99986 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.24□□□□□ -0.13
VRK1Q99986 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.24□□□□□ -0.13
VRK1Q99986 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.24□□□□□ -0.13
VRK1Q99986 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 WASH6P-202ENST00000359512 1437 ntBASIC14.24□□□□□ -0.13
VRK1Q99986 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
VRK1Q99986 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
VRK1Q99986 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.23□□□□□ -0.13
VRK1Q99986 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.23□□□□□ -0.13
VRK1Q99986 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
VRK1Q99986 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
VRK1Q99986 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 TUBB8P12-201ENST00000308911 1335 ntBASIC14.23□□□□□ -0.13
VRK1Q99986 TUBB7P-202ENST00000428444 1305 ntBASIC14.23□□□□□ -0.13
VRK1Q99986 TUBB8P7-204ENST00000567960 1332 ntBASIC14.23□□□□□ -0.13
VRK1Q99986 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 AC006538.1-201ENST00000567905 1585 ntBASIC14.23□□□□□ -0.13
VRK1Q99986 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.23□□□□□ -0.13
VRK1Q99986 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
VRK1Q99986 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.23□□□□□ -0.13
VRK1Q99986 HLA-J-203ENST00000494367 1087 ntBASIC14.23□□□□□ -0.13
VRK1Q99986 AC109322.1-201ENST00000524499 1264 ntBASIC14.23□□□□□ -0.13
VRK1Q99986 AC109635.5-201ENST00000533593 962 ntBASIC14.23□□□□□ -0.13
VRK1Q99986 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VRK1Q99986 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
VRK1Q99986 CYP2A7P1-201ENST00000595391 815 ntBASIC14.23□□□□□ -0.13
VRK1Q99986 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.23□□□□□ -0.13
VRK1Q99986 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.23□□□□□ -0.13
VRK1Q99986 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VRK1Q99986 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.23□□□□□ -0.13
VRK1Q99986 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.23□□□□□ -0.13
VRK1Q99986 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VRK1Q99986 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
VRK1Q99986 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.23□□□□□ -0.13
VRK1Q99986 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VRK1Q99986 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.23□□□□□ -0.13
VRK1Q99986 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.22□□□□□ -0.13
VRK1Q99986 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.22□□□□□ -0.13
VRK1Q99986 MTHFR-217ENST00000641820 1569 ntBASIC14.22□□□□□ -0.13
VRK1Q99986 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.22□□□□□ -0.13
VRK1Q99986 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
VRK1Q99986 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.22□□□□□ -0.13
VRK1Q99986 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
VRK1Q99986 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
VRK1Q99986 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.22□□□□□ -0.13
VRK1Q99986 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VRK1Q99986 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
VRK1Q99986 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.22□□□□□ -0.13
VRK1Q99986 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms