Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
LITAFQ99732 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC10.66□□□□□ -0.7
LITAFQ99732 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC10.66□□□□□ -0.7
LITAFQ99732 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LITAFQ99732 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 AC097359.2-201ENST00000604992 2389 ntBASIC10.66□□□□□ -0.7
LITAFQ99732 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LITAFQ99732 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 RCN1P2-201ENST00000398357 915 ntBASIC10.66□□□□□ -0.7
LITAFQ99732 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC10.66□□□□□ -0.7
LITAFQ99732 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC10.66□□□□□ -0.7
LITAFQ99732 SNORA78-201ENST00000459373 127 ntBASIC10.66□□□□□ -0.7
LITAFQ99732 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC10.66□□□□□ -0.7
LITAFQ99732 AC008550.1-201ENST00000511500 884 ntBASIC10.66□□□□□ -0.7
LITAFQ99732 LY6E-213ENST00000522528 606 ntTSL 3 BASIC10.66□□□□□ -0.7
LITAFQ99732 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 AC010203.1-204ENST00000548782 407 ntBASIC10.66□□□□□ -0.7
LITAFQ99732 AC005412.3-201ENST00000580309 715 ntBASIC10.66□□□□□ -0.7
LITAFQ99732 BSG-214ENST00000614867 960 ntTSL 3 BASIC10.66□□□□□ -0.7
LITAFQ99732 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC10.66□□□□□ -0.7
LITAFQ99732 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC10.66□□□□□ -0.7
LITAFQ99732 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LITAFQ99732 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC10.66□□□□□ -0.7
LITAFQ99732 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC10.66□□□□□ -0.7
LITAFQ99732 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC10.66□□□□□ -0.7
LITAFQ99732 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC10.66□□□□□ -0.7
LITAFQ99732 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LITAFQ99732 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC10.66□□□□□ -0.7
LITAFQ99732 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC10.66□□□□□ -0.7
LITAFQ99732 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC10.66□□□□□ -0.7
LITAFQ99732 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 FLII-221ENST00000578558 2377 ntTSL 5 BASIC10.66□□□□□ -0.7
LITAFQ99732 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC10.66□□□□□ -0.7
LITAFQ99732 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LITAFQ99732 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC10.65□□□□□ -0.7
LITAFQ99732 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC10.65□□□□□ -0.7
LITAFQ99732 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC10.65□□□□□ -0.7
LITAFQ99732 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC10.65□□□□□ -0.7
LITAFQ99732 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LITAFQ99732 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 AC068587.6-202ENST00000641839 5619 ntBASIC10.65□□□□□ -0.7
LITAFQ99732 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LITAFQ99732 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LITAFQ99732 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC10.65□□□□□ -0.7
LITAFQ99732 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC10.65□□□□□ -0.7
LITAFQ99732 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC10.65□□□□□ -0.7
LITAFQ99732 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
LITAFQ99732 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LITAFQ99732 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC10.65□□□□□ -0.7
LITAFQ99732 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LITAFQ99732 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC10.65□□□□□ -0.7
LITAFQ99732 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
LITAFQ99732 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC10.65□□□□□ -0.7
LITAFQ99732 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 PRYP5-201ENST00000451909 266 ntBASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms