Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV9Q99603 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV9Q99603 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.52□□□□□ -0.41
TRGV9Q99603 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV9Q99603 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.52□□□□□ -0.41
TRGV9Q99603 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.52□□□□□ -0.41
TRGV9Q99603 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
TRGV9Q99603 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV9Q99603 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.52□□□□□ -0.41
TRGV9Q99603 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.52□□□□□ -0.41
TRGV9Q99603 IGHV3-22-201ENST00000520721 359 ntBASIC12.52□□□□□ -0.41
TRGV9Q99603 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.52□□□□□ -0.41
TRGV9Q99603 AC024267.1-201ENST00000582320 895 ntBASIC12.52□□□□□ -0.41
TRGV9Q99603 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.52□□□□□ -0.41
TRGV9Q99603 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
TRGV9Q99603 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.52□□□□□ -0.41
TRGV9Q99603 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV9Q99603 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.52□□□□□ -0.41
TRGV9Q99603 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TRGV9Q99603 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV9Q99603 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV9Q99603 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.52□□□□□ -0.41
TRGV9Q99603 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV9Q99603 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV9Q99603 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TRGV9Q99603 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
TRGV9Q99603 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TRGV9Q99603 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV9Q99603 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.52□□□□□ -0.41
TRGV9Q99603 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV9Q99603 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV9Q99603 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.52□□□□□ -0.41
TRGV9Q99603 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV9Q99603 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV9Q99603 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.52□□□□□ -0.41
TRGV9Q99603 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV9Q99603 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV9Q99603 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV9Q99603 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.51□□□□□ -0.41
TRGV9Q99603 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV9Q99603 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.51□□□□□ -0.41
TRGV9Q99603 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV9Q99603 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV9Q99603 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV9Q99603 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
TRGV9Q99603 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV9Q99603 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV9Q99603 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV9Q99603 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.51□□□□□ -0.41
TRGV9Q99603 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV9Q99603 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.51□□□□□ -0.41
TRGV9Q99603 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV9Q99603 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
TRGV9Q99603 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV9Q99603 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.51□□□□□ -0.41
TRGV9Q99603 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
TRGV9Q99603 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
TRGV9Q99603 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.51□□□□□ -0.41
TRGV9Q99603 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV9Q99603 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.51□□□□□ -0.41
TRGV9Q99603 AC098859.1-201ENST00000502915 1238 ntBASIC12.51□□□□□ -0.41
TRGV9Q99603 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.51□□□□□ -0.41
TRGV9Q99603 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV9Q99603 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
TRGV9Q99603 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.51□□□□□ -0.41
TRGV9Q99603 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV9Q99603 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV9Q99603 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV9Q99603 AL031008.1-201ENST00000619963 541 ntBASIC12.51□□□□□ -0.41
TRGV9Q99603 BCAR1-209ENST00000546196 1340 ntBASIC12.51□□□□□ -0.41
TRGV9Q99603 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.51□□□□□ -0.41
TRGV9Q99603 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV9Q99603 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV9Q99603 AC025580.3-201ENST00000617932 1424 ntBASIC12.51□□□□□ -0.41
TRGV9Q99603 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TRGV9Q99603 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV9Q99603 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV9Q99603 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV9Q99603 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV9Q99603 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV9Q99603 PCDHA3-202ENST00000532566 4594 ntBASIC12.51□□□□□ -0.41
TRGV9Q99603 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV9Q99603 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV9Q99603 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV9Q99603 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TRGV9Q99603 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV9Q99603 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV9Q99603 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV9Q99603 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TRGV9Q99603 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV9Q99603 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.5□□□□□ -0.41
TRGV9Q99603 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV9Q99603 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV9Q99603 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.5□□□□□ -0.41
TRGV9Q99603 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV9Q99603 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.5□□□□□ -0.41
TRGV9Q99603 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
TRGV9Q99603 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV9Q99603 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
TRGV9Q99603 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms