Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.85□□□□□ -0.35
RNF2Q99496 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.85□□□□□ -0.35
RNF2Q99496 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.85□□□□□ -0.35
RNF2Q99496 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RNF2Q99496 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RNF2Q99496 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RNF2Q99496 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RNF2Q99496 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.85□□□□□ -0.35
RNF2Q99496 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
RNF2Q99496 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.85□□□□□ -0.35
RNF2Q99496 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RNF2Q99496 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.85□□□□□ -0.35
RNF2Q99496 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RNF2Q99496 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RNF2Q99496 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RNF2Q99496 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.85□□□□□ -0.35
RNF2Q99496 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.85□□□□□ -0.35
RNF2Q99496 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RNF2Q99496 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RNF2Q99496 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RNF2Q99496 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RNF2Q99496 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RNF2Q99496 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RNF2Q99496 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RNF2Q99496 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RNF2Q99496 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RNF2Q99496 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.84□□□□□ -0.35
RNF2Q99496 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.84□□□□□ -0.35
RNF2Q99496 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
RNF2Q99496 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.84□□□□□ -0.35
RNF2Q99496 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RNF2Q99496 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RNF2Q99496 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RNF2Q99496 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RNF2Q99496 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RNF2Q99496 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.84□□□□□ -0.35
RNF2Q99496 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RNF2Q99496 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.84□□□□□ -0.35
RNF2Q99496 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.84□□□□□ -0.35
RNF2Q99496 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.84□□□□□ -0.35
RNF2Q99496 AC108073.2-201ENST00000464002 357 ntBASIC12.84□□□□□ -0.35
RNF2Q99496 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.84□□□□□ -0.35
RNF2Q99496 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.84□□□□□ -0.35
RNF2Q99496 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.84□□□□□ -0.35
RNF2Q99496 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
RNF2Q99496 CYP2A7P1-201ENST00000595391 815 ntBASIC12.84□□□□□ -0.35
RNF2Q99496 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.84□□□□□ -0.35
RNF2Q99496 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.84□□□□□ -0.35
RNF2Q99496 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
RNF2Q99496 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RNF2Q99496 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RNF2Q99496 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.84□□□□□ -0.35
RNF2Q99496 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
RNF2Q99496 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.84□□□□□ -0.35
RNF2Q99496 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RNF2Q99496 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RNF2Q99496 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RNF2Q99496 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RNF2Q99496 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.84□□□□□ -0.35
RNF2Q99496 AL353732.1-201ENST00000569618 1459 ntBASIC12.84□□□□□ -0.35
RNF2Q99496 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RNF2Q99496 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RNF2Q99496 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.84□□□□□ -0.35
RNF2Q99496 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
RNF2Q99496 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RNF2Q99496 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RNF2Q99496 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RNF2Q99496 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
RNF2Q99496 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
RNF2Q99496 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
RNF2Q99496 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC12.83□□□□□ -0.35
RNF2Q99496 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.83□□□□□ -0.35
RNF2Q99496 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.83□□□□□ -0.35
RNF2Q99496 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RNF2Q99496 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF2Q99496 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF2Q99496 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF2Q99496 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF2Q99496 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF2Q99496 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
RNF2Q99496 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.83□□□□□ -0.36
RNF2Q99496 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF2Q99496 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.83□□□□□ -0.36
RNF2Q99496 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.83□□□□□ -0.36
RNF2Q99496 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF2Q99496 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF2Q99496 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF2Q99496 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.83□□□□□ -0.36
RNF2Q99496 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF2Q99496 MRPL20P1-201ENST00000400819 433 ntBASIC12.83□□□□□ -0.36
RNF2Q99496 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
RNF2Q99496 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC12.83□□□□□ -0.36
RNF2Q99496 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.83□□□□□ -0.36
RNF2Q99496 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.83□□□□□ -0.36
RNF2Q99496 AC087641.1-201ENST00000557561 1021 ntBASIC12.83□□□□□ -0.36
RNF2Q99496 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.83□□□□□ -0.36
RNF2Q99496 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.83□□□□□ -0.36
RNF2Q99496 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RNF2Q99496 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.83□□□□□ -0.36
RNF2Q99496 AC004790.2-201ENST00000623588 572 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms