Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.21■□□□□ 0.18
NOTCH4Q99466 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.21■□□□□ 0.18
NOTCH4Q99466 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.21■□□□□ 0.18
NOTCH4Q99466 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
NOTCH4Q99466 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
NOTCH4Q99466 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.21■□□□□ 0.18
NOTCH4Q99466 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.2■□□□□ 0.18
NOTCH4Q99466 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.2■□□□□ 0.18
NOTCH4Q99466 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NOTCH4Q99466 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NOTCH4Q99466 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NOTCH4Q99466 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NOTCH4Q99466 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.2■□□□□ 0.18
NOTCH4Q99466 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NOTCH4Q99466 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
NOTCH4Q99466 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NOTCH4Q99466 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.2■□□□□ 0.18
NOTCH4Q99466 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NOTCH4Q99466 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.2■□□□□ 0.18
NOTCH4Q99466 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
NOTCH4Q99466 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NOTCH4Q99466 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.2■□□□□ 0.18
NOTCH4Q99466 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
NOTCH4Q99466 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NOTCH4Q99466 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NOTCH4Q99466 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NOTCH4Q99466 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NOTCH4Q99466 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NOTCH4Q99466 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.19■□□□□ 0.18
NOTCH4Q99466 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NOTCH4Q99466 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NOTCH4Q99466 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.19■□□□□ 0.18
NOTCH4Q99466 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.19■□□□□ 0.18
NOTCH4Q99466 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NOTCH4Q99466 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NOTCH4Q99466 AC009486.1-201ENST00000569860 813 ntBASIC16.19■□□□□ 0.18
NOTCH4Q99466 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.19■□□□□ 0.18
NOTCH4Q99466 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NOTCH4Q99466 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.19■□□□□ 0.18
NOTCH4Q99466 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NOTCH4Q99466 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NOTCH4Q99466 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NOTCH4Q99466 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NOTCH4Q99466 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NOTCH4Q99466 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NOTCH4Q99466 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NOTCH4Q99466 AC006001.1-201ENST00000325130 474 ntBASIC16.19■□□□□ 0.18
NOTCH4Q99466 ACKR1-201ENST00000368121 1240 ntBASIC16.19■□□□□ 0.18
NOTCH4Q99466 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NOTCH4Q99466 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.19■□□□□ 0.18
NOTCH4Q99466 MTX1P1-201ENST00000440904 838 ntBASIC16.19■□□□□ 0.18
NOTCH4Q99466 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.19■□□□□ 0.18
NOTCH4Q99466 AP003171.2-201ENST00000528208 925 ntBASIC16.19■□□□□ 0.18
NOTCH4Q99466 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.19■□□□□ 0.18
NOTCH4Q99466 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.19■□□□□ 0.18
NOTCH4Q99466 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.19■□□□□ 0.18
NOTCH4Q99466 AC138951.2-201ENST00000623455 1161 ntBASIC16.19■□□□□ 0.18
NOTCH4Q99466 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NOTCH4Q99466 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NOTCH4Q99466 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
NOTCH4Q99466 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NOTCH4Q99466 PCDH8P1-201ENST00000428983 2773 ntBASIC16.19■□□□□ 0.18
NOTCH4Q99466 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NOTCH4Q99466 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NOTCH4Q99466 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NOTCH4Q99466 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NOTCH4Q99466 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NOTCH4Q99466 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NOTCH4Q99466 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NOTCH4Q99466 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NOTCH4Q99466 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NOTCH4Q99466 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.18■□□□□ 0.18
NOTCH4Q99466 AC104306.2-201ENST00000451877 341 ntBASIC16.18■□□□□ 0.18
NOTCH4Q99466 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.18■□□□□ 0.18
NOTCH4Q99466 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.18■□□□□ 0.18
NOTCH4Q99466 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.18■□□□□ 0.18
NOTCH4Q99466 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.18■□□□□ 0.18
NOTCH4Q99466 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NOTCH4Q99466 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NOTCH4Q99466 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NOTCH4Q99466 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.18■□□□□ 0.18
NOTCH4Q99466 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.18■□□□□ 0.18
NOTCH4Q99466 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
NOTCH4Q99466 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NOTCH4Q99466 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NOTCH4Q99466 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NOTCH4Q99466 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.18■□□□□ 0.18
NOTCH4Q99466 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NOTCH4Q99466 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NOTCH4Q99466 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NOTCH4Q99466 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.18■□□□□ 0.18
NOTCH4Q99466 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NOTCH4Q99466 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NOTCH4Q99466 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NOTCH4Q99466 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.18■□□□□ 0.18
NOTCH4Q99466 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.18■□□□□ 0.18
NOTCH4Q99466 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NOTCH4Q99466 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
NOTCH4Q99466 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.18■□□□□ 0.18
NOTCH4Q99466 AC004945.1-201ENST00000416738 983 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms