Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 AL592424.1-201ENST00000563624 1536 ntBASIC17.09■□□□□ 0.33
YME1L1Q96TA2 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
YME1L1Q96TA2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YME1L1Q96TA2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
YME1L1Q96TA2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.09■□□□□ 0.33
YME1L1Q96TA2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
YME1L1Q96TA2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
YME1L1Q96TA2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
YME1L1Q96TA2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.33
YME1L1Q96TA2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
YME1L1Q96TA2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
YME1L1Q96TA2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
YME1L1Q96TA2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
YME1L1Q96TA2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
YME1L1Q96TA2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
YME1L1Q96TA2 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.08■□□□□ 0.32
YME1L1Q96TA2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
YME1L1Q96TA2 KRT18P64-201ENST00000434946 1219 ntBASIC17.08■□□□□ 0.32
YME1L1Q96TA2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.08■□□□□ 0.32
YME1L1Q96TA2 AC012441.1-201ENST00000446669 685 ntBASIC17.08■□□□□ 0.32
YME1L1Q96TA2 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.08■□□□□ 0.32
YME1L1Q96TA2 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.08■□□□□ 0.32
YME1L1Q96TA2 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
YME1L1Q96TA2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.08■□□□□ 0.32
YME1L1Q96TA2 AP001063.1-201ENST00000568332 529 ntBASIC17.08■□□□□ 0.32
YME1L1Q96TA2 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
YME1L1Q96TA2 CLUHP6-201ENST00000580789 941 ntBASIC17.08■□□□□ 0.32
YME1L1Q96TA2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.08■□□□□ 0.32
YME1L1Q96TA2 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.08■□□□□ 0.32
YME1L1Q96TA2 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
YME1L1Q96TA2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
YME1L1Q96TA2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
YME1L1Q96TA2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
YME1L1Q96TA2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
YME1L1Q96TA2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
YME1L1Q96TA2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
YME1L1Q96TA2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
YME1L1Q96TA2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
YME1L1Q96TA2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
YME1L1Q96TA2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
YME1L1Q96TA2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
YME1L1Q96TA2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 AC009542.2-202ENST00000619004 1067 ntBASIC17.07■□□□□ 0.32
YME1L1Q96TA2 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.07■□□□□ 0.32
YME1L1Q96TA2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 AC106760.1-201ENST00000508690 800 ntBASIC17.06■□□□□ 0.32
YME1L1Q96TA2 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms