Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL21A1Q96P44 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL21A1Q96P44 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL21A1Q96P44 AC211486.1-202ENST00000416371 468 ntBASIC15.2■□□□□ 0.02
COL21A1Q96P44 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 TIMM8BP1-201ENST00000452384 211 ntBASIC15.2■□□□□ 0.02
COL21A1Q96P44 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 AC211476.1-201ENST00000503899 468 ntBASIC15.2■□□□□ 0.02
COL21A1Q96P44 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL21A1Q96P44 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL21A1Q96P44 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL21A1Q96P44 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL21A1Q96P44 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL21A1Q96P44 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL21A1Q96P44 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL21A1Q96P44 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL21A1Q96P44 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL21A1Q96P44 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL21A1Q96P44 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL21A1Q96P44 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL21A1Q96P44 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL21A1Q96P44 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL21A1Q96P44 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL21A1Q96P44 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL21A1Q96P44 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL21A1Q96P44 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL21A1Q96P44 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL21A1Q96P44 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL21A1Q96P44 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL21A1Q96P44 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL21A1Q96P44 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL21A1Q96P44 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL21A1Q96P44 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL21A1Q96P44 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL21A1Q96P44 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL21A1Q96P44 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL21A1Q96P44 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL21A1Q96P44 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL21A1Q96P44 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.19■□□□□ 0.02
COL21A1Q96P44 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL21A1Q96P44 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL21A1Q96P44 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.18■□□□□ 0.02
COL21A1Q96P44 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL21A1Q96P44 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms