Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 AC010336.2-201ENST00000564226 506 ntBASIC16.49■□□□□ 0.23
RPRD1AQ96P16 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPRD1AQ96P16 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 DOC2GP-204ENST00000639052 2548 ntBASIC16.48■□□□□ 0.23
RPRD1AQ96P16 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 REXO1L1P-202ENST00000608646 1974 ntBASIC16.48■□□□□ 0.23
RPRD1AQ96P16 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 EEF1DP4-201ENST00000446006 880 ntBASIC16.48■□□□□ 0.23
RPRD1AQ96P16 AC009477.1-201ENST00000452936 217 ntBASIC16.48■□□□□ 0.23
RPRD1AQ96P16 UGT1A2P-201ENST00000454886 866 ntBASIC16.48■□□□□ 0.23
RPRD1AQ96P16 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.48■□□□□ 0.23
RPRD1AQ96P16 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 LINC02447-202ENST00000501888 2146 ntBASIC16.48■□□□□ 0.23
RPRD1AQ96P16 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.48■□□□□ 0.23
RPRD1AQ96P16 CDC14C-201ENST00000428251 1719 ntBASIC16.48■□□□□ 0.23
RPRD1AQ96P16 AC069224.1-201ENST00000566372 1715 ntBASIC16.48■□□□□ 0.23
RPRD1AQ96P16 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 AZGP1P1-201ENST00000411909 902 ntBASIC16.47■□□□□ 0.23
RPRD1AQ96P16 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 FAM8A3P-201ENST00000427218 844 ntBASIC16.47■□□□□ 0.23
RPRD1AQ96P16 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 HIST3H2BA-201ENST00000436555 524 ntBASIC16.47■□□□□ 0.23
RPRD1AQ96P16 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.47■□□□□ 0.23
RPRD1AQ96P16 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms