Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.54□□□□□ -0.08
LRRC46Q96FV0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 CETN4P-206ENST00000642099 2168 ntBASIC14.53□□□□□ -0.08
LRRC46Q96FV0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 AC100757.3-201ENST00000622361 1406 ntBASIC14.53□□□□□ -0.08
LRRC46Q96FV0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 AC142381.1-201ENST00000426099 345 ntBASIC14.53□□□□□ -0.08
LRRC46Q96FV0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 SPTSSB-204ENST00000617024 1292 ntBASIC14.53□□□□□ -0.08
LRRC46Q96FV0 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC46Q96FV0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.52□□□□□ -0.08
LRRC46Q96FV0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRC46Q96FV0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
LRRC46Q96FV0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LRRC46Q96FV0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LRRC46Q96FV0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.52□□□□□ -0.08
LRRC46Q96FV0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.52□□□□□ -0.08
LRRC46Q96FV0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRC46Q96FV0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.52□□□□□ -0.08
LRRC46Q96FV0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.52□□□□□ -0.08
LRRC46Q96FV0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LRRC46Q96FV0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRC46Q96FV0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRC46Q96FV0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
LRRC46Q96FV0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.52□□□□□ -0.08
LRRC46Q96FV0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRC46Q96FV0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LRRC46Q96FV0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.52□□□□□ -0.08
LRRC46Q96FV0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 AC098859.1-201ENST00000502915 1238 ntBASIC14.52□□□□□ -0.09
LRRC46Q96FV0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms