Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 AC009477.1-201ENST00000452936 217 ntBASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 AC004890.2-204ENST00000481968 304 ntBASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 AC025048.3-201ENST00000590609 569 ntBASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 AC005702.4-201ENST00000618393 416 ntBASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 TARDBPP1-201ENST00000442013 1203 ntBASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 RN7SL618P-201ENST00000477850 296 ntBASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 ZNF890P-202ENST00000530367 1156 ntBASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 AC009407.1-201ENST00000568958 598 ntBASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 PAUPAR-201ENST00000630360 2965 ntBASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC4Q8N9L1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms