Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 AC097359.3-201ENST00000603982 1210 ntBASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 AC008738.7-201ENST00000609744 511 ntBASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 AL109936.8-201ENST00000641772 604 ntBASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 AL365203.3-201ENST00000609742 2057 ntBASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAM1L1Q8N609 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 AC114501.2-201ENST00000439631 535 ntBASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 TARDBPP1-201ENST00000442013 1203 ntBASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 UGT1A2P-201ENST00000454886 866 ntBASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.77■□□□□ 0.12
TRAM1L1Q8N609 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAM1L1Q8N609 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.77■□□□□ 0.11
TRAM1L1Q8N609 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAM1L1Q8N609 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.77■□□□□ 0.11
TRAM1L1Q8N609 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAM1L1Q8N609 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
TRAM1L1Q8N609 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAM1L1Q8N609 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAM1L1Q8N609 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.77■□□□□ 0.11
TRAM1L1Q8N609 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAM1L1Q8N609 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.77■□□□□ 0.11
TRAM1L1Q8N609 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAM1L1Q8N609 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms