Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 BX842568.4-201ENST00000421222 227 ntBASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 AC069335.1-201ENST00000489972 472 ntBASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 AC243562.2-201ENST00000561247 970 ntBASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.71□□□□□ -0.38
TTC9CQ8N5M4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TTC9CQ8N5M4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.71□□□□□ -0.38
TTC9CQ8N5M4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TTC9CQ8N5M4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.71□□□□□ -0.38
TTC9CQ8N5M4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TTC9CQ8N5M4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
TTC9CQ8N5M4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TTC9CQ8N5M4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
TTC9CQ8N5M4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TTC9CQ8N5M4 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.71□□□□□ -0.38
TTC9CQ8N5M4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 RPSAP43-201ENST00000402237 625 ntBASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 AC112482.1-201ENST00000492080 688 ntBASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 SLC25A39P2-201ENST00000537614 270 ntBASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 MIR4469-201ENST00000583919 79 ntBASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 AC022145.2-201ENST00000598203 171 ntBASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 AL513210.1-201ENST00000629608 234 ntBASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 AL691432.1-201ENST00000596308 1422 ntBASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TTC9CQ8N5M4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms