Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCUBE3Q8IX30 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SCUBE3Q8IX30 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.83■□□□□ 0.29
SCUBE3Q8IX30 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SCUBE3Q8IX30 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.83■□□□□ 0.29
SCUBE3Q8IX30 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
SCUBE3Q8IX30 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SCUBE3Q8IX30 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
SCUBE3Q8IX30 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SCUBE3Q8IX30 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 AC055876.3-201ENST00000431496 288 ntBASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 HLA-V-204ENST00000476601 1289 ntBASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 AC190387.1-201ENST00000551683 408 ntBASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 AC138649.4-201ENST00000612222 287 ntBASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 AC007950.2-201ENST00000615045 2347 ntBASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 AC073592.8-201ENST00000624126 511 ntBASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.83■□□□□ 0.28
SCUBE3Q8IX30 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 AL080243.2-201ENST00000418783 582 ntBASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 AC138761.1-201ENST00000584393 385 ntBASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 AL158211.3-201ENST00000607385 239 ntBASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCUBE3Q8IX30 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCUBE3Q8IX30 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.81■□□□□ 0.28
SCUBE3Q8IX30 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.81■□□□□ 0.28
SCUBE3Q8IX30 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.81■□□□□ 0.28
SCUBE3Q8IX30 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms