Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 AC135586.1-201ENST00000539323 574 ntBASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 RN7SL204P-201ENST00000582831 262 ntBASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 AC025048.3-201ENST00000590609 569 ntBASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 AL450472.2-201ENST00000603663 1156 ntBASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 AC005702.4-201ENST00000618393 416 ntBASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 AC004840.1-201ENST00000636359 365 ntBASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 AL109936.8-201ENST00000641772 604 ntBASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 NFIC-211ENST00000641145 8399 ntBASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LRRTM4Q86VH4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 AC236430.1-201ENST00000402231 743 ntBASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 AC002472.2-201ENST00000442739 958 ntBASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 LINC02560-201ENST00000596379 459 ntBASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 AC074044.1-201ENST00000609673 707 ntBASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 CDC14C-201ENST00000428251 1719 ntBASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM4Q86VH4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 LINC02447-202ENST00000501888 2146 ntBASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 AC114501.2-201ENST00000439631 535 ntBASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRTM4Q86VH4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms