Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC243562.2-201ENST00000561247 970 ntBASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LYSMD3Q7Z3D4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 AC107890.1-201ENST00000422478 521 ntBASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 AL589935.2-201ENST00000616471 1231 ntBASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 AC093512.1-201ENST00000617969 520 ntBASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 BNIP3P1-202ENST00000550043 1585 ntBASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.11■□□□□ 0.17
LYSMD3Q7Z3D4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 DUX4L27-201ENST00000554796 1261 ntBASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 AC104640.1-201ENST00000562617 2109 ntBASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 AC112504.1-201ENST00000623415 1841 ntBASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYSMD3Q7Z3D4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD3Q7Z3D4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD3Q7Z3D4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD3Q7Z3D4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
LYSMD3Q7Z3D4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD3Q7Z3D4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms