Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 AL139288.1-201ENST00000623748 933 ntBASIC14.08□□□□□ -0.16
C11orf88Q6PI97 TP73-AS1-207ENST00000624167 988 ntBASIC14.08□□□□□ -0.16
C11orf88Q6PI97 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 LINC00895-201ENST00000629028 1637 ntBASIC14.08□□□□□ -0.16
C11orf88Q6PI97 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 CICP13-201ENST00000422015 2789 ntBASIC14.07□□□□□ -0.16
C11orf88Q6PI97 GGT4P-201ENST00000623672 1708 ntBASIC14.07□□□□□ -0.16
C11orf88Q6PI97 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 SNX18-202ENST00000343017 3140 ntBASIC14.07□□□□□ -0.16
C11orf88Q6PI97 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 AC003669.1-201ENST00000334569 611 ntBASIC14.07□□□□□ -0.16
C11orf88Q6PI97 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 AC018712.1-201ENST00000455767 687 ntBASIC14.07□□□□□ -0.16
C11orf88Q6PI97 FGFR3P6-201ENST00000457012 610 ntBASIC14.07□□□□□ -0.16
C11orf88Q6PI97 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 GPALPP1-207ENST00000611650 899 ntBASIC14.07□□□□□ -0.16
C11orf88Q6PI97 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 AC023511.2-201ENST00000618803 211 ntBASIC14.07□□□□□ -0.16
C11orf88Q6PI97 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 IL9RP2-201ENST00000423948 1312 ntBASIC14.07□□□□□ -0.16
C11orf88Q6PI97 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 AP005117.1-201ENST00000584346 1413 ntBASIC14.07□□□□□ -0.16
C11orf88Q6PI97 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf88Q6PI97 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 AC138035.3-201ENST00000622706 2791 ntBASIC14.06□□□□□ -0.16
C11orf88Q6PI97 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms