Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 AC041040.2-201ENST00000622926 2899 ntBASIC14.42□□□□□ -0.1
CCDC58Q4VC31 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC58Q4VC31 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 AC006557.2-201ENST00000592985 1240 ntBASIC14.41□□□□□ -0.1
CCDC58Q4VC31 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC58Q4VC31 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.4□□□□□ -0.1
CCDC58Q4VC31 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 AC006504.4-201ENST00000592118 1568 ntBASIC14.4□□□□□ -0.1
CCDC58Q4VC31 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 SCARNA2-201ENST00000458748 420 ntBASIC14.4□□□□□ -0.1
CCDC58Q4VC31 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 AC021097.1-201ENST00000607902 574 ntBASIC14.4□□□□□ -0.1
CCDC58Q4VC31 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC58Q4VC31 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CCDC58Q4VC31 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC58Q4VC31 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms