Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
PDS5AQ29RF7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19■□□□□ 0.63
PDS5AQ29RF7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC19■□□□□ 0.63
PDS5AQ29RF7 SOCS2P1-201ENST00000417727 557 ntBASIC19■□□□□ 0.63
PDS5AQ29RF7 ATP5G2P4-201ENST00000442175 420 ntBASIC19■□□□□ 0.63
PDS5AQ29RF7 AC026410.3-201ENST00000514280 936 ntBASIC19■□□□□ 0.63
PDS5AQ29RF7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDS5AQ29RF7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC19■□□□□ 0.63
PDS5AQ29RF7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19■□□□□ 0.63
PDS5AQ29RF7 AL359881.2-201ENST00000602973 570 ntBASIC19■□□□□ 0.63
PDS5AQ29RF7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDS5AQ29RF7 CU634019.7-201ENST00000624153 1185 ntBASIC19■□□□□ 0.63
PDS5AQ29RF7 FP236241.2-201ENST00000624906 1185 ntBASIC19■□□□□ 0.63
PDS5AQ29RF7 AC138932.1-201ENST00000534164 6830 ntBASIC19■□□□□ 0.63
PDS5AQ29RF7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PDS5AQ29RF7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDS5AQ29RF7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19■□□□□ 0.63
PDS5AQ29RF7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDS5AQ29RF7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDS5AQ29RF7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDS5AQ29RF7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDS5AQ29RF7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PDS5AQ29RF7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PDS5AQ29RF7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDS5AQ29RF7 AC112504.1-201ENST00000623415 1841 ntBASIC19■□□□□ 0.63
PDS5AQ29RF7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDS5AQ29RF7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDS5AQ29RF7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19■□□□□ 0.63
PDS5AQ29RF7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PDS5AQ29RF7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDS5AQ29RF7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDS5AQ29RF7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PDS5AQ29RF7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
PDS5AQ29RF7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PDS5AQ29RF7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PDS5AQ29RF7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDS5AQ29RF7 PGF-202ENST00000405431 666 ntTSL 5 BASIC19■□□□□ 0.63
PDS5AQ29RF7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PDS5AQ29RF7 VDAC1P7-201ENST00000462417 847 ntBASIC19■□□□□ 0.63
PDS5AQ29RF7 GAPDHP40-201ENST00000505218 1006 ntBASIC19■□□□□ 0.63
PDS5AQ29RF7 KRT17P8-201ENST00000540749 863 ntBASIC19■□□□□ 0.63
PDS5AQ29RF7 HILS1-202ENST00000545329 423 ntBASIC19■□□□□ 0.63
PDS5AQ29RF7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDS5AQ29RF7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC19■□□□□ 0.63
PDS5AQ29RF7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19■□□□□ 0.63
PDS5AQ29RF7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.99■□□□□ 0.63
PDS5AQ29RF7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 AC112492.5-201ENST00000421897 457 ntBASIC18.99■□□□□ 0.63
PDS5AQ29RF7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 IGHV3-71-201ENST00000523324 359 ntBASIC18.99■□□□□ 0.63
PDS5AQ29RF7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDS5AQ29RF7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDS5AQ29RF7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms