Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40BQ12829 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40BQ12829 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40BQ12829 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40BQ12829 AL390755.1-201ENST00000623716 2027 ntBASIC14.38□□□□□ -0.11
RAB40BQ12829 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40BQ12829 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40BQ12829 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40BQ12829 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40BQ12829 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40BQ12829 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40BQ12829 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40BQ12829 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40BQ12829 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB40BQ12829 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB40BQ12829 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
RAB40BQ12829 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.38□□□□□ -0.11
RAB40BQ12829 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB40BQ12829 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB40BQ12829 AL031432.2-201ENST00000566714 459 ntBASIC14.38□□□□□ -0.11
RAB40BQ12829 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAB40BQ12829 AL928711.1-201ENST00000570165 459 ntBASIC14.38□□□□□ -0.11
RAB40BQ12829 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40BQ12829 AL121772.3-201ENST00000610840 674 ntBASIC14.38□□□□□ -0.11
RAB40BQ12829 MIR1199-201ENST00000621445 119 ntBASIC14.38□□□□□ -0.11
RAB40BQ12829 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB40BQ12829 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB40BQ12829 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RAB40BQ12829 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40BQ12829 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40BQ12829 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB40BQ12829 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40BQ12829 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAB40BQ12829 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40BQ12829 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40BQ12829 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40BQ12829 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40BQ12829 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40BQ12829 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40BQ12829 MROH4P-201ENST00000431302 1578 ntBASIC14.38□□□□□ -0.11
RAB40BQ12829 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RAB40BQ12829 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40BQ12829 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB40BQ12829 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RAB40BQ12829 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40BQ12829 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RAB40BQ12829 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RAB40BQ12829 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40BQ12829 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RAB40BQ12829 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
RAB40BQ12829 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40BQ12829 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB40BQ12829 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40BQ12829 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.37□□□□□ -0.11
RAB40BQ12829 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RAB40BQ12829 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RAB40BQ12829 KRT18P34-201ENST00000488218 1270 ntBASIC14.37□□□□□ -0.11
RAB40BQ12829 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40BQ12829 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.37□□□□□ -0.11
RAB40BQ12829 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.37□□□□□ -0.11
RAB40BQ12829 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 OR7E47P-204ENST00000575924 449 ntBASIC14.37□□□□□ -0.11
RAB40BQ12829 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.37□□□□□ -0.11
RAB40BQ12829 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RAB40BQ12829 REXO1L6P-202ENST00000619970 1078 ntBASIC14.37□□□□□ -0.11
RAB40BQ12829 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB40BQ12829 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB40BQ12829 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40BQ12829 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40BQ12829 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RAB40BQ12829 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB40BQ12829 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40BQ12829 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40BQ12829 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40BQ12829 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40BQ12829 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB40BQ12829 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RAB40BQ12829 AL589702.1-201ENST00000641229 1509 ntBASIC14.36□□□□□ -0.11
RAB40BQ12829 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40BQ12829 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms