Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDH1Q08174 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDH1Q08174 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDH1Q08174 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH1Q08174 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDH1Q08174 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
PCDH1Q08174 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDH1Q08174 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH1Q08174 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDH1Q08174 MIR3687-2-201ENST00000577708 61 ntBASIC15.46■□□□□ 0.07
PCDH1Q08174 MIR3687-1-201ENST00000614492 61 ntBASIC15.46■□□□□ 0.07
PCDH1Q08174 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH1Q08174 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH1Q08174 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH1Q08174 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH1Q08174 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH1Q08174 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PCDH1Q08174 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
PCDH1Q08174 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.46■□□□□ 0.06
PCDH1Q08174 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
PCDH1Q08174 AC022532.1-201ENST00000624563 1728 ntBASIC15.46■□□□□ 0.06
PCDH1Q08174 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PCDH1Q08174 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH1Q08174 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDH1Q08174 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.45■□□□□ 0.06
PCDH1Q08174 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH1Q08174 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PCDH1Q08174 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PCDH1Q08174 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH1Q08174 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDH1Q08174 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH1Q08174 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH1Q08174 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PCDH1Q08174 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDH1Q08174 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH1Q08174 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDH1Q08174 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH1Q08174 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDH1Q08174 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDH1Q08174 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH1Q08174 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
PCDH1Q08174 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.45■□□□□ 0.06
PCDH1Q08174 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.45■□□□□ 0.06
PCDH1Q08174 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.45■□□□□ 0.06
PCDH1Q08174 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDH1Q08174 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDH1Q08174 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDH1Q08174 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
PCDH1Q08174 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH1Q08174 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH1Q08174 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH1Q08174 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PCDH1Q08174 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH1Q08174 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH1Q08174 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDH1Q08174 REXO1L1P-202ENST00000608646 1974 ntBASIC15.45■□□□□ 0.06
PCDH1Q08174 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PCDH1Q08174 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH1Q08174 LINC00554-201ENST00000564841 3011 ntBASIC15.45■□□□□ 0.06
PCDH1Q08174 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH1Q08174 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH1Q08174 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDH1Q08174 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDH1Q08174 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDH1Q08174 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH1Q08174 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH1Q08174 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH1Q08174 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH1Q08174 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH1Q08174 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDH1Q08174 KRT8P37-201ENST00000451609 1420 ntBASIC15.44■□□□□ 0.06
PCDH1Q08174 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH1Q08174 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH1Q08174 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH1Q08174 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
PCDH1Q08174 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH1Q08174 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH1Q08174 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
PCDH1Q08174 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDH1Q08174 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH1Q08174 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH1Q08174 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH1Q08174 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH1Q08174 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH1Q08174 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
PCDH1Q08174 KRT18P13-201ENST00000400056 1290 ntBASIC15.44■□□□□ 0.06
PCDH1Q08174 SPDYE17-201ENST00000412399 783 ntBASIC15.44■□□□□ 0.06
PCDH1Q08174 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDH1Q08174 AC005237.2-201ENST00000434368 219 ntBASIC15.44■□□□□ 0.06
PCDH1Q08174 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.44■□□□□ 0.06
PCDH1Q08174 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH1Q08174 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH1Q08174 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDH1Q08174 AC004835.2-201ENST00000603762 682 ntBASIC15.44■□□□□ 0.06
PCDH1Q08174 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDH1Q08174 AC009093.7-201ENST00000623853 1223 ntBASIC15.44■□□□□ 0.06
PCDH1Q08174 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDH1Q08174 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDH1Q08174 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDH1Q08174 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms