Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBXN1Q04323 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UBXN1Q04323 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBXN1Q04323 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBXN1Q04323 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UBXN1Q04323 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBXN1Q04323 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
UBXN1Q04323 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.58■□□□□ 0.41
UBXN1Q04323 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UBXN1Q04323 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBXN1Q04323 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.58■□□□□ 0.4
UBXN1Q04323 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.58■□□□□ 0.4
UBXN1Q04323 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.58■□□□□ 0.4
UBXN1Q04323 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.58■□□□□ 0.4
UBXN1Q04323 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
UBXN1Q04323 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBXN1Q04323 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
UBXN1Q04323 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBXN1Q04323 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.58■□□□□ 0.4
UBXN1Q04323 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.58■□□□□ 0.4
UBXN1Q04323 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBXN1Q04323 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBXN1Q04323 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.58■□□□□ 0.4
UBXN1Q04323 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBXN1Q04323 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.58■□□□□ 0.4
UBXN1Q04323 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBXN1Q04323 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.58■□□□□ 0.4
UBXN1Q04323 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
UBXN1Q04323 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.58■□□□□ 0.4
UBXN1Q04323 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.58■□□□□ 0.4
UBXN1Q04323 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.58■□□□□ 0.4
UBXN1Q04323 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.58■□□□□ 0.4
UBXN1Q04323 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBXN1Q04323 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
UBXN1Q04323 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.57■□□□□ 0.4
UBXN1Q04323 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.57■□□□□ 0.4
UBXN1Q04323 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.57■□□□□ 0.4
UBXN1Q04323 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
UBXN1Q04323 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.57■□□□□ 0.4
UBXN1Q04323 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBXN1Q04323 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBXN1Q04323 HLA-A-201ENST00000376802 1334 ntBASIC17.57■□□□□ 0.4
UBXN1Q04323 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.57■□□□□ 0.4
UBXN1Q04323 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBXN1Q04323 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBXN1Q04323 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.57■□□□□ 0.4
UBXN1Q04323 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.57■□□□□ 0.4
UBXN1Q04323 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.57■□□□□ 0.4
UBXN1Q04323 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.57■□□□□ 0.4
UBXN1Q04323 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBXN1Q04323 KRT18P2-201ENST00000447938 1258 ntBASIC17.57■□□□□ 0.4
UBXN1Q04323 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.57■□□□□ 0.4
UBXN1Q04323 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.57■□□□□ 0.4
UBXN1Q04323 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.57■□□□□ 0.4
UBXN1Q04323 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBXN1Q04323 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBXN1Q04323 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBXN1Q04323 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
UBXN1Q04323 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBXN1Q04323 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBXN1Q04323 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBXN1Q04323 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
UBXN1Q04323 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.57■□□□□ 0.4
UBXN1Q04323 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBXN1Q04323 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBXN1Q04323 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBXN1Q04323 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBXN1Q04323 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.57■□□□□ 0.4
UBXN1Q04323 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBXN1Q04323 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.57■□□□□ 0.4
UBXN1Q04323 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBXN1Q04323 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBXN1Q04323 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBXN1Q04323 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.56■□□□□ 0.4
UBXN1Q04323 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.56■□□□□ 0.4
UBXN1Q04323 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.56■□□□□ 0.4
UBXN1Q04323 AC104109.2-201ENST00000602919 1418 ntBASIC17.56■□□□□ 0.4
UBXN1Q04323 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
UBXN1Q04323 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
UBXN1Q04323 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
UBXN1Q04323 LINC02228-204ENST00000642115 2962 ntBASIC17.56■□□□□ 0.4
UBXN1Q04323 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBXN1Q04323 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.56■□□□□ 0.4
UBXN1Q04323 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBXN1Q04323 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.56■□□□□ 0.4
UBXN1Q04323 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.56■□□□□ 0.4
UBXN1Q04323 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBXN1Q04323 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBXN1Q04323 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBXN1Q04323 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBXN1Q04323 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.56■□□□□ 0.4
UBXN1Q04323 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBXN1Q04323 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBXN1Q04323 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.56■□□□□ 0.4
UBXN1Q04323 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.56■□□□□ 0.4
UBXN1Q04323 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.56■□□□□ 0.4
UBXN1Q04323 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.56■□□□□ 0.4
UBXN1Q04323 AC034105.1-201ENST00000563488 319 ntBASIC17.56■□□□□ 0.4
UBXN1Q04323 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.56■□□□□ 0.4
UBXN1Q04323 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms