Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 AL031284.1-201ENST00000419297 478 ntBASIC12.35□□□□□ -0.43
HIST1H1AQ02539 AL513480.1-201ENST00000451731 511 ntBASIC12.35□□□□□ -0.43
HIST1H1AQ02539 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 MIR4515-201ENST00000584082 81 ntBASIC12.35□□□□□ -0.43
HIST1H1AQ02539 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.35□□□□□ -0.43
HIST1H1AQ02539 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.35□□□□□ -0.43
HIST1H1AQ02539 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H1AQ02539 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.34□□□□□ -0.43
HIST1H1AQ02539 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms