Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.87□□□□□ -0.03
HOXC5Q00444 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 AC013268.4-201ENST00000637413 2228 ntBASIC14.87□□□□□ -0.03
HOXC5Q00444 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HOXC5Q00444 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.87□□□□□ -0.03
HOXC5Q00444 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.87□□□□□ -0.03
HOXC5Q00444 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HOXC5Q00444 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HOXC5Q00444 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.87□□□□□ -0.03
HOXC5Q00444 AC112191.1-201ENST00000523689 701 ntBASIC14.87□□□□□ -0.03
HOXC5Q00444 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.87□□□□□ -0.03
HOXC5Q00444 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.87□□□□□ -0.03
HOXC5Q00444 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.87□□□□□ -0.03
HOXC5Q00444 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
HOXC5Q00444 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.87□□□□□ -0.03
HOXC5Q00444 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HOXC5Q00444 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.87□□□□□ -0.03
HOXC5Q00444 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.87□□□□□ -0.03
HOXC5Q00444 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 AC134407.2-201ENST00000625089 1978 ntBASIC14.87□□□□□ -0.03
HOXC5Q00444 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.87□□□□□ -0.03
HOXC5Q00444 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC5Q00444 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HOXC5Q00444 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC5Q00444 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC5Q00444 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
HOXC5Q00444 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC5Q00444 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
HOXC5Q00444 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC5Q00444 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC5Q00444 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC5Q00444 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.86□□□□□ -0.03
HOXC5Q00444 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC5Q00444 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC5Q00444 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.86□□□□□ -0.03
HOXC5Q00444 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.86□□□□□ -0.03
HOXC5Q00444 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC5Q00444 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC5Q00444 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC5Q00444 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HOXC5Q00444 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC5Q00444 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HOXC5Q00444 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.86□□□□□ -0.03
HOXC5Q00444 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.86□□□□□ -0.03
HOXC5Q00444 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.86□□□□□ -0.03
HOXC5Q00444 AL591424.1-201ENST00000442569 1213 ntBASIC14.86□□□□□ -0.03
HOXC5Q00444 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.86□□□□□ -0.03
HOXC5Q00444 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.86□□□□□ -0.03
HOXC5Q00444 FAM197Y3-203ENST00000618346 717 ntBASIC14.86□□□□□ -0.03
HOXC5Q00444 AC091812.2-201ENST00000619081 385 ntBASIC14.86□□□□□ -0.03
HOXC5Q00444 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.86□□□□□ -0.03
HOXC5Q00444 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HOXC5Q00444 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.86□□□□□ -0.03
HOXC5Q00444 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC5Q00444 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.86□□□□□ -0.03
HOXC5Q00444 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.86□□□□□ -0.03
HOXC5Q00444 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.86□□□□□ -0.03
HOXC5Q00444 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC5Q00444 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC5Q00444 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC5Q00444 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC5Q00444 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC5Q00444 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.86□□□□□ -0.03
HOXC5Q00444 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC5Q00444 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.86□□□□□ -0.03
HOXC5Q00444 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
HOXC5Q00444 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.85□□□□□ -0.03
HOXC5Q00444 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HOXC5Q00444 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.85□□□□□ -0.03
HOXC5Q00444 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC5Q00444 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms