Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.39□□□□□ -0.59
RPL39P62891 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC11.39□□□□□ -0.59
RPL39P62891 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
RPL39P62891 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
RPL39P62891 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC11.39□□□□□ -0.59
RPL39P62891 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC11.39□□□□□ -0.59
RPL39P62891 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
RPL39P62891 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC11.39□□□□□ -0.59
RPL39P62891 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC11.39□□□□□ -0.59
RPL39P62891 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC11.39□□□□□ -0.59
RPL39P62891 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
RPL39P62891 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
RPL39P62891 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RPL39P62891 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
RPL39P62891 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
RPL39P62891 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC11.38□□□□□ -0.59
RPL39P62891 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
RPL39P62891 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
RPL39P62891 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC11.38□□□□□ -0.59
RPL39P62891 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 UCKL1-AS1-201ENST00000623569 3602 ntBASIC11.38□□□□□ -0.59
RPL39P62891 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
RPL39P62891 C18orf15-201ENST00000623680 2534 ntBASIC11.38□□□□□ -0.59
RPL39P62891 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC11.38□□□□□ -0.59
RPL39P62891 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
RPL39P62891 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
RPL39P62891 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
RPL39P62891 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
RPL39P62891 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC11.38□□□□□ -0.59
RPL39P62891 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC11.38□□□□□ -0.59
RPL39P62891 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC11.38□□□□□ -0.59
RPL39P62891 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC11.38□□□□□ -0.59
RPL39P62891 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
RPL39P62891 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC11.38□□□□□ -0.59
RPL39P62891 AC012615.1-201ENST00000565797 1299 ntBASIC11.38□□□□□ -0.59
RPL39P62891 RN7SL850P-201ENST00000579959 291 ntBASIC11.38□□□□□ -0.59
RPL39P62891 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC11.38□□□□□ -0.59
RPL39P62891 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
RPL39P62891 AL139288.1-201ENST00000623748 933 ntBASIC11.38□□□□□ -0.59
RPL39P62891 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC11.38□□□□□ -0.59
RPL39P62891 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC11.38□□□□□ -0.59
RPL39P62891 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC11.38□□□□□ -0.59
RPL39P62891 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
RPL39P62891 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC11.38□□□□□ -0.59
RPL39P62891 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
RPL39P62891 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC11.38□□□□□ -0.59
RPL39P62891 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC11.38□□□□□ -0.59
RPL39P62891 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RPL39P62891 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
RPL39P62891 AC112693.3-201ENST00000624819 1983 ntBASIC11.37□□□□□ -0.59
RPL39P62891 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 AC005089.1-201ENST00000619486 2241 ntBASIC11.37□□□□□ -0.59
RPL39P62891 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
RPL39P62891 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
RPL39P62891 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
RPL39P62891 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.37□□□□□ -0.59
RPL39P62891 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
RPL39P62891 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC11.37□□□□□ -0.59
RPL39P62891 AC211429.1-201ENST00000415277 523 ntBASIC11.37□□□□□ -0.59
RPL39P62891 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC11.37□□□□□ -0.59
RPL39P62891 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
RPL39P62891 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC11.37□□□□□ -0.59
RPL39P62891 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms