Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
AP3S2P59780 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.82□□□□□ -0.2
AP3S2P59780 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.82□□□□□ -0.2
AP3S2P59780 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.82□□□□□ -0.2
AP3S2P59780 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.82□□□□□ -0.2
AP3S2P59780 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.82□□□□□ -0.2
AP3S2P59780 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.82□□□□□ -0.2
AP3S2P59780 AP000867.4-201ENST00000641616 219 ntBASIC13.82□□□□□ -0.2
AP3S2P59780 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
AP3S2P59780 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.82□□□□□ -0.2
AP3S2P59780 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.82□□□□□ -0.2
AP3S2P59780 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.82□□□□□ -0.2
AP3S2P59780 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.82□□□□□ -0.2
AP3S2P59780 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP3S2P59780 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.81□□□□□ -0.2
AP3S2P59780 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP3S2P59780 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.81□□□□□ -0.2
AP3S2P59780 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
AP3S2P59780 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
AP3S2P59780 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP3S2P59780 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.81□□□□□ -0.2
AP3S2P59780 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP3S2P59780 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP3S2P59780 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
AP3S2P59780 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP3S2P59780 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP3S2P59780 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP3S2P59780 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP3S2P59780 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
AP3S2P59780 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP3S2P59780 ARMC10P1-201ENST00000313754 855 ntBASIC13.81□□□□□ -0.2
AP3S2P59780 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP3S2P59780 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP3S2P59780 AC112907.2-201ENST00000448639 330 ntBASIC13.81□□□□□ -0.2
AP3S2P59780 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.81□□□□□ -0.2
AP3S2P59780 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.81□□□□□ -0.2
AP3S2P59780 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.81□□□□□ -0.2
AP3S2P59780 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.81□□□□□ -0.2
AP3S2P59780 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
AP3S2P59780 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
AP3S2P59780 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
AP3S2P59780 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.81□□□□□ -0.2
AP3S2P59780 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP3S2P59780 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP3S2P59780 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP3S2P59780 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
AP3S2P59780 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP3S2P59780 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP3S2P59780 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.81□□□□□ -0.2
AP3S2P59780 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP3S2P59780 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP3S2P59780 AC005912.2-201ENST00000619492 2400 ntBASIC13.81□□□□□ -0.2
AP3S2P59780 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.81□□□□□ -0.2
AP3S2P59780 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP3S2P59780 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP3S2P59780 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
AP3S2P59780 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
AP3S2P59780 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.8□□□□□ -0.2
AP3S2P59780 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.8□□□□□ -0.2
AP3S2P59780 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
AP3S2P59780 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
AP3S2P59780 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
AP3S2P59780 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.8□□□□□ -0.2
AP3S2P59780 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.8□□□□□ -0.2
AP3S2P59780 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 INTS4P1-201ENST00000438455 1935 ntBASIC13.8□□□□□ -0.2
AP3S2P59780 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.8□□□□□ -0.2
AP3S2P59780 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
AP3S2P59780 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.8□□□□□ -0.2
AP3S2P59780 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.8□□□□□ -0.2
AP3S2P59780 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
AP3S2P59780 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
AP3S2P59780 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.8□□□□□ -0.2
AP3S2P59780 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
AP3S2P59780 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 PAWRP1-201ENST00000451083 565 ntBASIC13.8□□□□□ -0.2
AP3S2P59780 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms