Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC005357.2-202ENST00000590507 1060 ntBASIC17.55■□□□□ 0.4
BRCA2P51587 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRCA2P51587 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCA2P51587 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.55■□□□□ 0.4
BRCA2P51587 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRCA2P51587 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
BRCA2P51587 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.55■□□□□ 0.4
BRCA2P51587 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRCA2P51587 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCA2P51587 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRCA2P51587 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCA2P51587 MIR1202-201ENST00000408529 83 ntBASIC17.54■□□□□ 0.4
BRCA2P51587 AL353726.2-201ENST00000623259 884 ntBASIC17.54■□□□□ 0.4
BRCA2P51587 AL121723.1-201ENST00000445194 1519 ntBASIC17.54■□□□□ 0.4
BRCA2P51587 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.54■□□□□ 0.4
BRCA2P51587 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
BRCA2P51587 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.54■□□□□ 0.4
BRCA2P51587 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
BRCA2P51587 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
BRCA2P51587 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRCA2P51587 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.54■□□□□ 0.4
BRCA2P51587 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRCA2P51587 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
BRCA2P51587 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRCA2P51587 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCA2P51587 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCA2P51587 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCA2P51587 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCA2P51587 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.54■□□□□ 0.4
BRCA2P51587 SLED1-202ENST00000512051 380 ntBASIC17.54■□□□□ 0.4
BRCA2P51587 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC17.54■□□□□ 0.4
BRCA2P51587 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.54■□□□□ 0.4
BRCA2P51587 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.54■□□□□ 0.4
BRCA2P51587 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRCA2P51587 AC016396.2-201ENST00000562575 1417 ntBASIC17.54■□□□□ 0.4
BRCA2P51587 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.54■□□□□ 0.4
BRCA2P51587 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRCA2P51587 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.54■□□□□ 0.4
BRCA2P51587 TUBB8P12-201ENST00000308911 1335 ntBASIC17.54■□□□□ 0.4
BRCA2P51587 TUBB7P-202ENST00000428444 1305 ntBASIC17.54■□□□□ 0.4
BRCA2P51587 TUBB8P7-204ENST00000567960 1332 ntBASIC17.54■□□□□ 0.4
BRCA2P51587 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCA2P51587 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRCA2P51587 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.54■□□□□ 0.4
BRCA2P51587 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.54■□□□□ 0.4
BRCA2P51587 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCA2P51587 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.54■□□□□ 0.4
BRCA2P51587 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRCA2P51587 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
BRCA2P51587 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
BRCA2P51587 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
BRCA2P51587 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.54■□□□□ 0.4
BRCA2P51587 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCA2P51587 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCA2P51587 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRCA2P51587 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCA2P51587 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.54■□□□□ 0.4
BRCA2P51587 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCA2P51587 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
BRCA2P51587 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRCA2P51587 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRCA2P51587 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.53■□□□□ 0.4
BRCA2P51587 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.53■□□□□ 0.4
BRCA2P51587 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC17.53■□□□□ 0.4
BRCA2P51587 AC015910.1-201ENST00000579400 975 ntBASIC17.53■□□□□ 0.4
BRCA2P51587 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRCA2P51587 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.53■□□□□ 0.4
BRCA2P51587 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.53■□□□□ 0.4
BRCA2P51587 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRCA2P51587 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRCA2P51587 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.53■□□□□ 0.4
BRCA2P51587 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRCA2P51587 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.53■□□□□ 0.4
BRCA2P51587 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRCA2P51587 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRCA2P51587 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
BRCA2P51587 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.53■□□□□ 0.4
BRCA2P51587 AC004899.1-201ENST00000424687 1714 ntBASIC17.53■□□□□ 0.4
BRCA2P51587 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.53■□□□□ 0.4
BRCA2P51587 BNIP3P1-202ENST00000550043 1585 ntBASIC17.53■□□□□ 0.4
BRCA2P51587 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.53■□□□□ 0.4
BRCA2P51587 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.53■□□□□ 0.4
BRCA2P51587 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRCA2P51587 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRCA2P51587 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRCA2P51587 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRCA2P51587 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRCA2P51587 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.53■□□□□ 0.4
BRCA2P51587 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
BRCA2P51587 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.53■□□□□ 0.4
BRCA2P51587 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRCA2P51587 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.53■□□□□ 0.4
BRCA2P51587 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC17.53■□□□□ 0.4
BRCA2P51587 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.53■□□□□ 0.4
BRCA2P51587 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.53■□□□□ 0.4
BRCA2P51587 RN7SL713P-201ENST00000582127 302 ntBASIC17.53■□□□□ 0.4
BRCA2P51587 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRCA2P51587 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
BRCA2P51587 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRCA2P51587 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms