Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.9■□□□□ 0.3
TUBP50607 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBP50607 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBP50607 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBP50607 MRPS18AP1-201ENST00000414458 589 ntBASIC16.9■□□□□ 0.3
TUBP50607 AC002472.2-201ENST00000442739 958 ntBASIC16.9■□□□□ 0.3
TUBP50607 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.9■□□□□ 0.3
TUBP50607 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.9■□□□□ 0.3
TUBP50607 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBP50607 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.9■□□□□ 0.3
TUBP50607 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.9■□□□□ 0.3
TUBP50607 RN7SL204P-201ENST00000582831 262 ntBASIC16.9■□□□□ 0.3
TUBP50607 AL844908.2-201ENST00000609461 460 ntBASIC16.9■□□□□ 0.3
TUBP50607 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TUBP50607 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBP50607 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBP50607 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TUBP50607 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBP50607 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBP50607 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBP50607 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBP50607 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBP50607 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.9■□□□□ 0.3
TUBP50607 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBP50607 KRT8P12-202ENST00000472924 1397 ntBASIC16.89■□□□□ 0.3
TUBP50607 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.89■□□□□ 0.3
TUBP50607 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TUBP50607 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TUBP50607 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
TUBP50607 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TUBP50607 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.89■□□□□ 0.29
TUBP50607 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TUBP50607 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TUBP50607 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.89■□□□□ 0.29
TUBP50607 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TUBP50607 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBP50607 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TUBP50607 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.89■□□□□ 0.29
TUBP50607 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.89■□□□□ 0.29
TUBP50607 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.89■□□□□ 0.29
TUBP50607 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.89■□□□□ 0.29
TUBP50607 SERBP1P3-201ENST00000459980 809 ntBASIC16.89■□□□□ 0.29
TUBP50607 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.89■□□□□ 0.29
TUBP50607 TERF1P3-201ENST00000505638 1227 ntBASIC16.89■□□□□ 0.29
TUBP50607 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TUBP50607 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TUBP50607 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.89■□□□□ 0.29
TUBP50607 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.89■□□□□ 0.29
TUBP50607 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.89■□□□□ 0.29
TUBP50607 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TUBP50607 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TUBP50607 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.89■□□□□ 0.29
TUBP50607 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.89■□□□□ 0.29
TUBP50607 AC009118.2-201ENST00000613275 655 ntBASIC16.89■□□□□ 0.29
TUBP50607 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.89■□□□□ 0.29
TUBP50607 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.89■□□□□ 0.29
TUBP50607 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBP50607 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.89■□□□□ 0.29
TUBP50607 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBP50607 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBP50607 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.89■□□□□ 0.29
TUBP50607 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TUBP50607 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TUBP50607 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBP50607 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
TUBP50607 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TUBP50607 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TUBP50607 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.88■□□□□ 0.29
TUBP50607 REXO1L8P-201ENST00000604378 1897 ntBASIC16.88■□□□□ 0.29
TUBP50607 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TUBP50607 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
TUBP50607 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBP50607 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TUBP50607 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TUBP50607 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBP50607 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.88■□□□□ 0.29
TUBP50607 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TUBP50607 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBP50607 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBP50607 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TUBP50607 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBP50607 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBP50607 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.88■□□□□ 0.29
TUBP50607 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.88■□□□□ 0.29
TUBP50607 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.88■□□□□ 0.29
TUBP50607 MIR661-201ENST00000384842 89 ntBASIC16.88■□□□□ 0.29
TUBP50607 AC236430.1-201ENST00000402231 743 ntBASIC16.88■□□□□ 0.29
TUBP50607 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.88■□□□□ 0.29
TUBP50607 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBP50607 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.88■□□□□ 0.29
TUBP50607 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.88■□□□□ 0.29
TUBP50607 AC138761.1-201ENST00000584393 385 ntBASIC16.88■□□□□ 0.29
TUBP50607 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.88■□□□□ 0.29
TUBP50607 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.88■□□□□ 0.29
TUBP50607 AC008761.3-201ENST00000624803 892 ntBASIC16.88■□□□□ 0.29
TUBP50607 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.88■□□□□ 0.29
TUBP50607 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.88■□□□□ 0.29
TUBP50607 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TUBP50607 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBP50607 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms