Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
LHX2P50458 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX2P50458 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LHX2P50458 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX2P50458 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LHX2P50458 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LHX2P50458 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX2P50458 LINC02447-202ENST00000501888 2146 ntBASIC14.24□□□□□ -0.13
LHX2P50458 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.24□□□□□ -0.13
LHX2P50458 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LHX2P50458 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX2P50458 AL391005.1-201ENST00000623953 2435 ntBASIC14.24□□□□□ -0.13
LHX2P50458 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LHX2P50458 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.24□□□□□ -0.13
LHX2P50458 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.24□□□□□ -0.13
LHX2P50458 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX2P50458 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX2P50458 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX2P50458 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LHX2P50458 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.24□□□□□ -0.13
LHX2P50458 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX2P50458 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LHX2P50458 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.24□□□□□ -0.13
LHX2P50458 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.24□□□□□ -0.13
LHX2P50458 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.24□□□□□ -0.13
LHX2P50458 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.24□□□□□ -0.13
LHX2P50458 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.24□□□□□ -0.13
LHX2P50458 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.24□□□□□ -0.13
LHX2P50458 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.24□□□□□ -0.13
LHX2P50458 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX2P50458 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.24□□□□□ -0.13
LHX2P50458 AP005018.1-201ENST00000525475 301 ntBASIC14.24□□□□□ -0.13
LHX2P50458 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LHX2P50458 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.24□□□□□ -0.13
LHX2P50458 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.24□□□□□ -0.13
LHX2P50458 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.24□□□□□ -0.13
LHX2P50458 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.24□□□□□ -0.13
LHX2P50458 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX2P50458 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX2P50458 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LHX2P50458 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LHX2P50458 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.24□□□□□ -0.13
LHX2P50458 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX2P50458 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.24□□□□□ -0.13
LHX2P50458 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LHX2P50458 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.24□□□□□ -0.13
LHX2P50458 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX2P50458 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LHX2P50458 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.23□□□□□ -0.13
LHX2P50458 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX2P50458 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.23□□□□□ -0.13
LHX2P50458 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX2P50458 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
LHX2P50458 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LHX2P50458 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX2P50458 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX2P50458 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.23□□□□□ -0.13
LHX2P50458 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX2P50458 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX2P50458 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
LHX2P50458 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.23□□□□□ -0.13
LHX2P50458 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX2P50458 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.23□□□□□ -0.13
LHX2P50458 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX2P50458 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX2P50458 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.23□□□□□ -0.13
LHX2P50458 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LHX2P50458 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.23□□□□□ -0.13
LHX2P50458 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LHX2P50458 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.23□□□□□ -0.13
LHX2P50458 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LHX2P50458 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.23□□□□□ -0.13
LHX2P50458 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LHX2P50458 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
LHX2P50458 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.23□□□□□ -0.13
LHX2P50458 CHCHD2P3-201ENST00000603038 451 ntBASIC14.23□□□□□ -0.13
LHX2P50458 AC099568.2-201ENST00000609194 695 ntBASIC14.23□□□□□ -0.13
LHX2P50458 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.23□□□□□ -0.13
LHX2P50458 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LHX2P50458 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.23□□□□□ -0.13
LHX2P50458 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX2P50458 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX2P50458 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LHX2P50458 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX2P50458 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX2P50458 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.23□□□□□ -0.13
LHX2P50458 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.23□□□□□ -0.13
LHX2P50458 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LHX2P50458 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LHX2P50458 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.23□□□□□ -0.13
LHX2P50458 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LHX2P50458 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LHX2P50458 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX2P50458 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LHX2P50458 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LHX2P50458 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LHX2P50458 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LHX2P50458 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms