Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC073352.2-201ENST00000609385 439 ntBASIC17.9■□□□□ 0.46
TM4SF4P48230 ZACNP1-201ENST00000612259 710 ntBASIC17.9■□□□□ 0.46
TM4SF4P48230 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.9■□□□□ 0.46
TM4SF4P48230 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.9■□□□□ 0.46
TM4SF4P48230 AC011491.1-203ENST00000637688 543 ntBASIC17.9■□□□□ 0.46
TM4SF4P48230 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.9■□□□□ 0.46
TM4SF4P48230 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.9■□□□□ 0.46
TM4SF4P48230 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF4P48230 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.9■□□□□ 0.46
TM4SF4P48230 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.9■□□□□ 0.46
TM4SF4P48230 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TM4SF4P48230 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF4P48230 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TM4SF4P48230 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM4SF4P48230 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.9■□□□□ 0.46
TM4SF4P48230 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TM4SF4P48230 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TM4SF4P48230 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.9■□□□□ 0.46
TM4SF4P48230 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TM4SF4P48230 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
TM4SF4P48230 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TM4SF4P48230 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.89■□□□□ 0.46
TM4SF4P48230 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TM4SF4P48230 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.89■□□□□ 0.45
TM4SF4P48230 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF4P48230 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF4P48230 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.89■□□□□ 0.45
TM4SF4P48230 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TM4SF4P48230 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.89■□□□□ 0.45
TM4SF4P48230 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF4P48230 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF4P48230 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF4P48230 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.89■□□□□ 0.45
TM4SF4P48230 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.89■□□□□ 0.45
TM4SF4P48230 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.89■□□□□ 0.45
TM4SF4P48230 PGAM1P5-201ENST00000548011 764 ntBASIC17.89■□□□□ 0.45
TM4SF4P48230 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.89■□□□□ 0.45
TM4SF4P48230 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TM4SF4P48230 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.89■□□□□ 0.45
TM4SF4P48230 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF4P48230 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.89■□□□□ 0.45
TM4SF4P48230 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF4P48230 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF4P48230 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF4P48230 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
TM4SF4P48230 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF4P48230 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF4P48230 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.89■□□□□ 0.45
TM4SF4P48230 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM4SF4P48230 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.88■□□□□ 0.45
TM4SF4P48230 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.88■□□□□ 0.45
TM4SF4P48230 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TM4SF4P48230 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TM4SF4P48230 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TM4SF4P48230 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.88■□□□□ 0.45
TM4SF4P48230 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.88■□□□□ 0.45
TM4SF4P48230 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.88■□□□□ 0.45
TM4SF4P48230 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.88■□□□□ 0.45
TM4SF4P48230 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TM4SF4P48230 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.88■□□□□ 0.45
TM4SF4P48230 AP001002.3-201ENST00000623482 206 ntBASIC17.88■□□□□ 0.45
TM4SF4P48230 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.88■□□□□ 0.45
TM4SF4P48230 KRT8P29-201ENST00000420409 1371 ntBASIC17.88■□□□□ 0.45
TM4SF4P48230 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.88■□□□□ 0.45
TM4SF4P48230 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TM4SF4P48230 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.88■□□□□ 0.45
TM4SF4P48230 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF4P48230 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TM4SF4P48230 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF4P48230 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF4P48230 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC17.87■□□□□ 0.45
TM4SF4P48230 CHMP1AP1-201ENST00000445563 662 ntBASIC17.87■□□□□ 0.45
TM4SF4P48230 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.87■□□□□ 0.45
TM4SF4P48230 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF4P48230 AC100850.1-201ENST00000506768 649 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms